| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834862
GI number: 15834862
Start: 280934
End: 281533
Strand: Reverse
Name: Not Available
Synonym: TC0242
Alternate gene names: 15834862
Gene position: 281533-280934 (Counterclockwise)
Preceding gene: 15834863
Following gene: 15834861
Centisome position: 26.24
GC content: 43.33
Gene sequence:
>600_bases ATGGACTGGTCATTCTTTTTATTGTCTCAGAGCTGTATCTTATTTTTGGCTTCGGATTCTATGACTAATGTCGAGGTCCT CAATAAAATCCTTAGTAATCTATCCAAAAAAAGCCAAGCTCTACTACTGATCCGCGAAAGTCTTTTTGCTCTTCTAGGGG TATTTATTTTTTATCCTGGGCTTTCAGGGCTTATTTACTCCCTGCAAACACCTCCGTGCGCAGTCACTTTTGTTGGAGGA TGCGGAGTTATGTTAGCGGGCATGCGAGCAATCCTTCGGAATACCCATCCAGACCGTTGGGGTAAGTTTTCCTCTCTTTC TCATGCACCCAAAGTAGCGCCTATAGCGCTCCCTTTGATGATTGGGCCTTCGTGGTTGTGTGCCTGCGCACCTTTAACCA CGCAACAAATCCCCTTTTCTATTATTTGTGCGTTGCTATTTCTTTCTTGGTTAATGATGTCGATAACTACAATTGTTCTC CATCTAACCAGCAAGGCAGGCTCTCAGGCAATCATTGCAACACAAACCATTTTAGGACTTGTTGTCGTAATTATAGGCGC GCAACTCCTTGTATCTGGTTTACAGCAAACTTTCCTATAA
Upstream 100 bases:
>100_bases CTTCTCTTATTAATTCAGTTTCACTAAATCTCAGTTTGGACTAAAATTTTCCAAGGTCTTTTTTTTTCAGACACAATCAA CCTTCTTACAAATATATTTT
Downstream 100 bases:
>100_bases GAAAGCAGAGGTATATTTATGCTACATTCACTGTTTCGCCTTACCTTACTTTTTTATGCTCTTTTTAACTCCCTGGGATC TTTACCAGTCTTTGTTGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL
Sequences:
>Translated_199_residues MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL >Mature_199_residues MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPGLSGLIYSLQTPPCAVTFVGG CGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLMIGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVL HLTSKAGSQAIIATQTILGLVVVIIGAQLLVSGLQQTFL
Specific function: Unknown
COG id: COG2095
COG function: function code U; Multiple antibiotic transporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21471; Mature: 21471
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPG CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSGLIYSLQTPPCAVTFVGGCGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLM HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH IGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVLHLTSKAGSQAIIATQTILGL CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VVVIIGAQLLVSGLQQTFL HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDWSFFLLSQSCILFLASDSMTNVEVLNKILSNLSKKSQALLLIRESLFALLGVFIFYPG CCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC LSGLIYSLQTPPCAVTFVGGCGVMLAGMRAILRNTHPDRWGKFSSLSHAPKVAPIALPLM HHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH IGPSWLCACAPLTTQQIPFSIICALLFLSWLMMSITTIVLHLTSKAGSQAIIATQTILGL CCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH VVVIIGAQLLVSGLQQTFL HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA