| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834809
GI number: 15834809
Start: 220353
End: 221705
Strand: Reverse
Name: Not Available
Synonym: TC0189
Alternate gene names: NA
Gene position: 221705-220353 (Counterclockwise)
Preceding gene: 15834810
Following gene: 15834801
Centisome position: 20.66
GC content: 37.62
Gene sequence:
>1353_bases ATGATTTTGCCTTACTATTCCTCAGGATTACGCATTGGATCTGCCGTTCTATTTTTTTCTGCAGTGATCCATACTTTTCT TACTCCATGGTTAACGCGACTATATGAGGAATGTCTGCATAAAAAGATGATTTTTCCAGAACGCTGGCGTCAATACCTTT GGTTAAGTGAACTTCTTCGTATTGTTAGCCGCGTTGAATTAGTGTTTGTGCTTTGGGCGATCCCTCTGTTTTTTTTATTT TTGTATACAGAGGGGTATCGCGTAACAATGGCCTACTTCGATAGCCGTAACTACGTATTCTCTCTTTTTATTGTTGTTAT GCTGATTCTTCTCGAATCACGTCCTATCGAATATTTATCCCAAAGAATCTTTTCATCAGTCGCTAAAATTGGAAAGCAGT CTCCGATTTGTTGGTGGTGGACCATTATGATTGCAGCACCACTATCTACTTTCTTCCTTAAAGAATCCGGGGCAATGATT ATTGCTGCGACACTACTGTCAAAACACTTTTATCAACTCGCACCATCTCCCAAGTTTTGCTATGCAACTATGGGATTACT CTTTTCTAATATTTCGATTAGTGGATTGACTTCATCTTTCTCATCTCGAGCACTACTCACTATTCTTCCAGAAATTAAAT GGACGAGTAGTTTCATTATCACCCATTTCTGTTGGAAAGTCATTTTAGCTGTCCTTATCTCCACAACGATTTTTTTCTTA TTCTTCCGCAAGGAATTCAAAAAATTTCCTAAGACAATTCCAAGTTCAACCATAATGCAGAATCGAGTCCCTTATTGGAC TATTTTCATTCATGTTGTCTTGGTTGGATGTGTCATTCTCAGCCGAGCAATTCCTTTGTTTTTGGGCTTTATTCTTGTTT TCTACTTAGGGTTTCAACGCTTCACTATTTTTTATCAAAACCCAATCAAAACAGCGAAAGTCTGCTTTGTAGGATTATTT TATGCAGGGGTAGTGATTTTCGGAGAACTTCAAGAATGGTGGATGCTTGATTTAATGCACGGTATGTCAGACTTTGGCTA TATGATGACCTCATATATGTTTTCTATATTCTTAGATAATGCCTTAGTAAACCATATTGTGCATAACCTCCCCATGGCTA ATGATTGCTATCTATATCTGGTACTTGTTGGAAGTATGTCTGCAGGAGGATTAACACTTGTGTCCAACATGCCTAATATT GTTGGATACCTTATTCTTAGACCGACTTTCCCCCAATCAGATATCTCTTTAATTAGACTATTTTGGTCAGCATTGATCCC CTCTATTGTATCCTTAAGTATTTTTTGGCTTCTTAGAGGAATCCCCTCATTTATGTTTTGTTTATTTCGCTGA
Upstream 100 bases:
>100_bases TCCGAAATAGTGATAGGGATCTAGGAGTTACTTAAAAGTTACCTAGTGACAAAATACTTTTTGGTACGACAAAAAGACAT CCCTCTATCTTGTGAGCTCT
Downstream 100 bases:
>100_bases CAAAGGAAAGAACTCTTTTCTAAAAAAGCCTTTACAGAGTGTAGACAAGTTTTTGCTATCGAAAAAAATCAAGTATTTTT GTACTAAGGATACAACAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 450; Mature: 450
Protein sequence:
>450_residues MILPYYSSGLRIGSAVLFFSAVIHTFLTPWLTRLYEECLHKKMIFPERWRQYLWLSELLRIVSRVELVFVLWAIPLFFLF LYTEGYRVTMAYFDSRNYVFSLFIVVMLILLESRPIEYLSQRIFSSVAKIGKQSPICWWWTIMIAAPLSTFFLKESGAMI IAATLLSKHFYQLAPSPKFCYATMGLLFSNISISGLTSSFSSRALLTILPEIKWTSSFIITHFCWKVILAVLISTTIFFL FFRKEFKKFPKTIPSSTIMQNRVPYWTIFIHVVLVGCVILSRAIPLFLGFILVFYLGFQRFTIFYQNPIKTAKVCFVGLF YAGVVIFGELQEWWMLDLMHGMSDFGYMMTSYMFSIFLDNALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPNI VGYLILRPTFPQSDISLIRLFWSALIPSIVSLSIFWLLRGIPSFMFCLFR
Sequences:
>Translated_450_residues MILPYYSSGLRIGSAVLFFSAVIHTFLTPWLTRLYEECLHKKMIFPERWRQYLWLSELLRIVSRVELVFVLWAIPLFFLF LYTEGYRVTMAYFDSRNYVFSLFIVVMLILLESRPIEYLSQRIFSSVAKIGKQSPICWWWTIMIAAPLSTFFLKESGAMI IAATLLSKHFYQLAPSPKFCYATMGLLFSNISISGLTSSFSSRALLTILPEIKWTSSFIITHFCWKVILAVLISTTIFFL FFRKEFKKFPKTIPSSTIMQNRVPYWTIFIHVVLVGCVILSRAIPLFLGFILVFYLGFQRFTIFYQNPIKTAKVCFVGLF YAGVVIFGELQEWWMLDLMHGMSDFGYMMTSYMFSIFLDNALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPNI VGYLILRPTFPQSDISLIRLFWSALIPSIVSLSIFWLLRGIPSFMFCLFR >Mature_450_residues MILPYYSSGLRIGSAVLFFSAVIHTFLTPWLTRLYEECLHKKMIFPERWRQYLWLSELLRIVSRVELVFVLWAIPLFFLF LYTEGYRVTMAYFDSRNYVFSLFIVVMLILLESRPIEYLSQRIFSSVAKIGKQSPICWWWTIMIAAPLSTFFLKESGAMI IAATLLSKHFYQLAPSPKFCYATMGLLFSNISISGLTSSFSSRALLTILPEIKWTSSFIITHFCWKVILAVLISTTIFFL FFRKEFKKFPKTIPSSTIMQNRVPYWTIFIHVVLVGCVILSRAIPLFLGFILVFYLGFQRFTIFYQNPIKTAKVCFVGLF YAGVVIFGELQEWWMLDLMHGMSDFGYMMTSYMFSIFLDNALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPNI VGYLILRPTFPQSDISLIRLFWSALIPSIVSLSIFWLLRGIPSFMFCLFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52174; Mature: 52174
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILPYYSSGLRIGSAVLFFSAVIHTFLTPWLTRLYEECLHKKMIFPERWRQYLWLSELLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IVSRVELVFVLWAIPLFFLFLYTEGYRVTMAYFDSRNYVFSLFIVVMLILLESRPIEYLS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHH QRIFSSVAKIGKQSPICWWWTIMIAAPLSTFFLKESGAMIIAATLLSKHFYQLAPSPKFC HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH YATMGLLFSNISISGLTSSFSSRALLTILPEIKWTSSFIITHFCWKVILAVLISTTIFFL HHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRKEFKKFPKTIPSSTIMQNRVPYWTIFIHVVLVGCVILSRAIPLFLGFILVFYLGFQR HHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIFYQNPIKTAKVCFVGLFYAGVVIFGELQEWWMLDLMHGMSDFGYMMTSYMFSIFLDN HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPNIVGYLILRPTFPQSDISLIRL HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHH FWSALIPSIVSLSIFWLLRGIPSFMFCLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MILPYYSSGLRIGSAVLFFSAVIHTFLTPWLTRLYEECLHKKMIFPERWRQYLWLSELLR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IVSRVELVFVLWAIPLFFLFLYTEGYRVTMAYFDSRNYVFSLFIVVMLILLESRPIEYLS HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHH QRIFSSVAKIGKQSPICWWWTIMIAAPLSTFFLKESGAMIIAATLLSKHFYQLAPSPKFC HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH YATMGLLFSNISISGLTSSFSSRALLTILPEIKWTSSFIITHFCWKVILAVLISTTIFFL HHHHHHHHHCCCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRKEFKKFPKTIPSSTIMQNRVPYWTIFIHVVLVGCVILSRAIPLFLGFILVFYLGFQR HHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FTIFYQNPIKTAKVCFVGLFYAGVVIFGELQEWWMLDLMHGMSDFGYMMTSYMFSIFLDN HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVNHIVHNLPMANDCYLYLVLVGSMSAGGLTLVSNMPNIVGYLILRPTFPQSDISLIRL HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHCCCCCCCHHHHHHHH FWSALIPSIVSLSIFWLLRGIPSFMFCLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA