Definition | Bacillus halodurans C-125 chromosome, complete genome. |
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Accession | NC_002570 |
Length | 4,202,352 |
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The map label for this gene is pdpF
Identifier: 15615791
GI number:
Start: 3344068
End: 3346968
Strand: Direct
Name: pdpF
Synonym: BH3229
Alternate gene names: NA
Gene position: NA
Preceding gene: 15615779
Following gene: 15615797
Centisome position: NA
GC content: NA
Gene sequence:
>2901_bases ATGAAGAACGCCCTTTCGCAAATCCGTTCTCGCATTCAATCGATTATTACCATATTGCGAGAGAAGAAGATCTTTCGAGG GATTGGCGTAACCTATTTAGTTGCTTGGAACTTAACCCTTGTCTTTCTCGTTGGCGCCCTTGTCCTTTTCGTGTTTATCG GAAGTGCAGGCGCTGGCTATTTTGCTTCTCTCGTCCGGGATGAGCCTCTCCGCTCGGCAGATGAGATGAGGCAGGATATT TTTGATTATGAAGAAACGAGTCAAGTGTTCTTTGCAAACAATGTCTATCTCGGGGAACTTCCCGCAGAAGTAGAACGCCA TTACGTTGCCCTCGACGACATCTCAGAACATCTCATACACGCGATTATCGCCACCGAGGATGAATACTTCTACGAGCATG ATGGCATCGTTCCAAAAGCCATCCTACGCGCAACCTATCAAGAATTTGCTGGCTCTTCTGTCCAAACGGGAGGAAGCACG CTTACTCAACAGTTGATCAAAAACCAAATTCTAACGAGTGACGTTTCTTTTGACCGAAAAGCGACTGAAATTCTTCTCGC CATGCGCCTTGAACATTTTCTCGAAAAAGAAGAAATTCTTGAAGCTTACTTAAATGTTGTACCATTTGGACGGAACGCCT CAGGCAGGCAGGTCGCAGGTGCTCAAGCAGCGGCAAAAGGCATTTTCGGCGTTGACGCCAAAGATTTAAACTTGCCGCAA GCTGCTTTTATTGCTGGTCTTCCGCAAAGCCCATTCGGCTATACACCGTTTACGAGCACAGGGGAAGTAAAGGAAGATCT AGAGCCTGGACTTAGACGGATGAAAACCGTTTTAAACCGTCTTTACACCAATGGATACATTACAGAAAGTGAGCTAGAGG AAGCGCTAGACTATGACATACGTGAAAACTTAACAAACCGTAAAAAATCGCCTATTGAAAAGTATCCATACTTAACCTAT GAAGTGATGAAACGTGGAGAAGAAGTCCTCTACAACTTAAAATTAAAAGAGCTTGACGTTGATTTAGATGAGTTAGAGGA AGAAGAACGGCAATCACTTTTAAACAATCTTAGAGAAGAAGCGAAACATGAATTACGCCATAATGGCTACCGCATTCATA CGACCATTGACAAAAACATTTATGAAGCGATGAATAATGCAGTCAAGGACGACTCCCTTTTCGGACCGACGATTGCAGGG GAACAAGAACAAGTCGGTGCTCTCTTACTGGAAAATTCGACAGGGGCGATCAAAGGGTTCGTTGCTGGTCGCGATGAAGG AAGTGCAGAAGACCAATACAACCACGCGACGCAAGCGTATCGTCCAAACGGATCAACGATGAAGCCGCTTTTAGCTTACG GTCCAGCGATGGAGATTGGTGCCGCTCAACCAGGTTTCGTCATTCCTGATACACCTGCAACGTATCCAGGCACTTCAACA CCTATTAACAACTTTGATCGTACGCATATGGGACTCATCTCTGTTCGTGAATCGCTTGCCCGCTCTCGTAACGTTCCTGC CGTGCGTGCCTTTTTACAGGTGCCACATGAACAGTCACGGGAAACGATGCGTAAGCTTGGTTTTCAGCTAAACGACGGAG AACCGTACCCTGCAGCAGCGTTAGGAGCAACCGATCACAACGTCACAGTAGAGCAAAACACGAACGCATTTGCTACGTTT GCAAACGGTGGTCAATACGTCGAATCCTATATGATCGAAAAAATTGAAACAGCAGACGGAACCGTAATTTATGAGCATAA ATCAAAGTCAGTTGACGTGTTCACCCCACAGACATCGTACTTAATGATCGATATGATGCGCGACGTGCTCCGCGGTGTCG GAACAGCGAATTCTTTACCAGGACGAATGAAATTTTCTGCCGATTGGGCAGGAAAAACAGGAACATCAAGTGAGGTTAAG GATTCTTGGTTCGTTGGACTAAATCCGAACGTCACCTTGGGCGTATGGATCGGTTATGATACACCGAAAACGATTCAAAG CCCATGGAATGGCTTACGCTACGGGCCGCGTACGCAACAAATTTGGGCGCGAATTGCCAATGCTGCTTATGATGAAAATC CTGAGCTGATGGCACCGAATCAGTCGTTCGAAATGCCTGAAGGAATCGTCCGTCGATCCGTTTGTAGCATCACAGGAACC GCACCATCAAAAGCGTGTGAGCAAGCAGGGCTTGTGACATCCGATTTGTTCAACGCAAAGTTCTTGCCGAAATCTGGAGA TGATGGTTTAGAATCTGCTCGTTACGTCACGATTAATGGAAAAAACTATTTAGCTCTTGATTCTACGCCACAAGAGTTCA CAGAAGCTGGGCTACGGCTATCATCAGGGGCTTGGAACATGGACAACATGGGTCAATATTTGCCAGATAACCTAAAAGGA TTAATTCCTGACAAAAAAGCACCGAATAACGGAAAAACGCCTGGTCCTGTCTCAAATATCCGCTTAAACGGCACGACGCT TCAATGGGATAAACATACAGCAGGTGACATTGTCGGGTATCGAATCTATCGAGTGAATGGTGGCTCGGCAGAACGGGTTG GCTCTGTTAAAGGAAACGAAACGACATCTTATAACGTCAGCAACGGTAACCATTCTTATTATGTAACAGCCGTTGATTCG GTTGGTCGTGAATCTAGCCGCTCCTCAGCCGTTCAAGGAAAAACTGCGAGCGTCTCATCAAAGAGTAGCCAGACATCCTC AGATGAAAAGAAAGAGGAGAAGAAAAAAGAAGAGAAGAAGGAAGAAAAGAATGAGGAAAAGAAAGACGATAAGAAGAAGC AGGAGAACGAGCAAAACAACAAACGCGAAGACGATAAACCAGATGACGACGGAGGATCCGACGATGGGGATGATGATTCT TCTTCTGACGATGACCGTTAG
Upstream 100 bases:
>100_bases GCCTTTAGACAAGCTTTACGAAATCATATCGACATTCGACAGTTTGTGCTATAATGACTCATGATATTATCCCTTCTTCG TTCACAAAAGGAGGCTGAAC
Downstream 100 bases:
>100_bases GAATACGATAGGGACCATTAATTAATATGATACCTATAGATAGGACACTTGAAAAAGAGTGTTCATCTATAGGTATTTTT TATACACTTACATTTAGAGG
Product: penicillin-binding protein 1A
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>966_residues MKNALSQIRSRIQSIITILREKKIFRGIGVTYLVAWNLTLVFLVGALVLFVFIGSAGAGYFASLVRDEPLRSADEMRQDI FDYEETSQVFFANNVYLGELPAEVERHYVALDDISEHLIHAIIATEDEYFYEHDGIVPKAILRATYQEFAGSSVQTGGST LTQQLIKNQILTSDVSFDRKATEILLAMRLEHFLEKEEILEAYLNVVPFGRNASGRQVAGAQAAAKGIFGVDAKDLNLPQ AAFIAGLPQSPFGYTPFTSTGEVKEDLEPGLRRMKTVLNRLYTNGYITESELEEALDYDIRENLTNRKKSPIEKYPYLTY EVMKRGEEVLYNLKLKELDVDLDELEEEERQSLLNNLREEAKHELRHNGYRIHTTIDKNIYEAMNNAVKDDSLFGPTIAG EQEQVGALLLENSTGAIKGFVAGRDEGSAEDQYNHATQAYRPNGSTMKPLLAYGPAMEIGAAQPGFVIPDTPATYPGTST PINNFDRTHMGLISVRESLARSRNVPAVRAFLQVPHEQSRETMRKLGFQLNDGEPYPAAALGATDHNVTVEQNTNAFATF ANGGQYVESYMIEKIETADGTVIYEHKSKSVDVFTPQTSYLMIDMMRDVLRGVGTANSLPGRMKFSADWAGKTGTSSEVK DSWFVGLNPNVTLGVWIGYDTPKTIQSPWNGLRYGPRTQQIWARIANAAYDENPELMAPNQSFEMPEGIVRRSVCSITGT APSKACEQAGLVTSDLFNAKFLPKSGDDGLESARYVTINGKNYLALDSTPQEFTEAGLRLSSGAWNMDNMGQYLPDNLKG LIPDKKAPNNGKTPGPVSNIRLNGTTLQWDKHTAGDIVGYRIYRVNGGSAERVGSVKGNETTSYNVSNGNHSYYVTAVDS VGRESSRSSAVQGKTASVSSKSSQTSSDEKKEEKKKEEKKEEKNEEKKDDKKKQENEQNNKREDDKPDDDGGSDDGDDDS SSDDDR
Sequences:
NA
Specific function: NA
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA