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The map label for this gene is ssb

Identifier: 13358117

GI number: 13358117

Start: 686662

End: 687162

Strand: Reverse

Name: ssb

Synonym: UU553

Alternate gene names: 13358117

Gene position: 687162-686662 (Counterclockwise)

Preceding gene: 13358118

Following gene: 13358116

Centisome position: 91.41

GC content: 30.94

Gene sequence:

>501_bases
ATGAATAAAGTAATATTGATTGGTAATTTAGTACGTGATCCAGAAGCTCGTCAAATACCAAGTGGGCGTTTAGTTACTAA
CTTTACAATCGCTGTAAATGACAATACACCTAATGCTAATGCAAATTTTATACGTTGTGTTGCTTGAAATAATCAGGCTA
ATTTCTTAACAACATATTTAAAAAAGGGTGATGCCATTGCAATTGAAGGACGTATAGTTTCTCGAAGTTATGTCGACAAT
AATGGTAAAACAAATTATGTAACTGAAGTTTACGCTGATCAAGTTCAATCATTATCACGTCGAAACCAAAGTCCTAGTGA
TAACAATAAGGTAAATGTTGATACAATGATGGAATCATATACAGGTATTAATACTGATGCAGCATTTAGTTCAAACAAAC
CTCAAACTACCCTTTCATCGACAACATCAAATTTAAATAAAAATAATGATGAAGAAGATGAAATTACAAGTTGAATTAAT
CTTGATGATGATTTAGAATAG

Upstream 100 bases:

>100_bases
AAGCAGCTGGTTTGCCAGTTAAAGAATTTGTTAAAAACACAAATTCAAAACGTTAAAAATAACGTATTTTAATTTAACTT
TAAAGATATTGAGGCGTAAA

Downstream 100 bases:

>100_bases
GAGATTTTATGGCCAAAGTAACTAATAACCGTAATCGTAAACCACGTAAAAAAGTTTGTATTTTATCTGCTAAAGGAATC
GAACATGTCGATTACAAAGA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVAWNNQANFLTTYLKKGDAIAIEGRIVSRSYVDN
NGKTNYVTEVYADQVQSLSRRNQSPSDNNKVNVDTMMESYTGINTDAAFSSNKPQTTLSSTTSNLNKNNDEEDEITSWIN
LDDDLE

Sequences:

>Translated_166_residues
MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVA*NNQANFLTTYLKKGDAIAIEGRIVSRSYVDN
NGKTNYVTEVYADQVQSLSRRNQSPSDNNKVNVDTMMESYTGINTDAAFSSNKPQTTLSSTTSNLNKNNDEEDEITS*IN
LDDDLE
>Mature_166_residues
MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVA*NNQANFLTTYLKKGDAIAIEGRIVSRSYVDN
NGKTNYVTEVYADQVQSLSRRNQSPSDNNKVNVDTMMESYTGINTDAAFSSNKPQTTLSSTTSNLNKNNDEEDEITS*IN
LDDDLE

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=97, Percent_Identity=36.0824742268041, Blast_Score=67, Evalue=8e-13,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 18092; Mature: 18092

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVANNQANFLTTYLK
CCEEEEEECCCCCCCHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHC
KGDAIAIEGRIVSRSYVDNNGKTNYVTEVYADQVQSLSRRNQSPSDNNKVNVDTMMESYT
CCCEEEEECEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHC
GINTDAAFSSNKPQTTLSSTTSNLNKNNDEEDEITSINLDDDLE
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNKVILIGNLVRDPEARQIPSGRLVTNFTIAVNDNTPNANANFIRCVANNQANFLTTYLK
CCEEEEEECCCCCCCHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHC
KGDAIAIEGRIVSRSYVDNNGKTNYVTEVYADQVQSLSRRNQSPSDNNKVNVDTMMESYT
CCCEEEEECEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHC
GINTDAAFSSNKPQTTLSSTTSNLNKNNDEEDEITSINLDDDLE
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]