Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
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Accession | NC_002162 |
Length | 751,719 |
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Identifier: 13358072
GI number: 13358072
Start: 629003
End: 630673
Strand: Reverse
Name: Not Available
Synonym: UU509
Alternate gene names: NA
Gene position: 630673-629003 (Counterclockwise)
Preceding gene: 13358075
Following gene: 13358071
Centisome position: 83.9
GC content: 26.15
Gene sequence:
>1671_bases ATGGCTAAAATTAATTTTTTATCGTTAGGAGGACAAGATGAAAGAGGAAAATCTTGCTTTGTTCTTGAAGTGAACGATGA TATTTTTATTTTTAATGCTGGTGCGAAAATTCCAACAAGTGATGTTTTTGGCGTAAATATGATTGTTTGTGATTATTCTT ATTTAGAAAAAAACGCAAAACGCGTTAAGGGAATTTTTATTGGTACACCAACATTTAATAATGTTATGGGAATTAAATTA TTACTAGGACAAGTAGGTTATAAAATCCCAATTTACACAAGCCCAATAGGAGCAATTGTTATTAAAAAAATTTTTGAACA AAAAGTAAACAATAAAAAAATTGAACCTAATATTATTGAGCTAGATCCAATTTCAGATAAGAAAATTGGATCAATTTATG TTACATCTTTTAAAGTTTCAAACTCAATGCCTCATTCATATGGATTTGTATTAAAAACAAGCGATGGAGCAATTGTTTAT GTTGATGAGTTTATTATTTCAAATGATAAAAATAAAACCTTTGATTCACAAATTAATCTTTTAAATAACATTACTAAAAA TAATACTCTAGCTTTGATTGTAGGAATGGGTCAAGCAGGAAATCCTTATTTTACTGCTCCCAATCATAAAAATAAGGCTT TTTATGAAGCTGCATTGCAAAATACTAAAAATCGTTTAATTGTTGGTTGTTATAGCAATGATGCATATAGTATTTTTACT TTGGCAACAATTGCAAAACAACAAAATCGCCCCTTTATTGTTTATAGTAATAACTTCATTAACACTTTTATTGGTGTATT GAAATTGAAATTATTTAATAGTAAAAATTTAATTTCTTTACCGGTTTCTGAAATTAATAATTCAAAAAATGCAATTATTG TGGTAATTGAAAATCAAGATACTCTTTTTTCAAAATTAAATAAAATTCTACATAACGAAGATAAATATGTTAATTTGTCT TCTGATGATCAACTAATATTAGGCGTTGTTATTACACCAGGTTTTGAAATGTTAGCAGCTGAACTAAGTGATGAAGTAGG TCGTTTAGACATTCCTTATAAAGCATTACCTAAAACAGTTTTACCAATGACACAATCTGATGAAGATTTAAAACATCTAA TTAATTTTTTACAACCAAAATTTTTAATTCCAATTAATGGATTATATAAAACTGAGGTTAAATTTAGTTCTACAGTTACA ACATCTTGAATTAAAAGTGATCAGATTATTAGTGTTTCTAATGGCGAATTATTCACTATAGAAGATAAAGTTTTAAATCC TAAACCCCAAATTATTGAGTTAGAAGATAAATATATTTCATCTTTTGATGCACTTGATGTTGGTGCTAATATTTTATTTG AACGATCACAAATGGGCGAGAATGGTGTTATTAATTTAATTGTTATTTTTGATAAACAATTCCAAAAACTATTTAATTAT GTTGAATTTGATTATTGTGGAGTTGTTAATAATGACGCTCAAATTAAAGAAATTGAAGAAACATTTAAAAAACGTATGGG TGAATGTTTAGTTTATGATGAACGTAAACGCTTAATACTAAAAGATACCAAAGCAAATTTAAAACGTTTATTAACTAAAT TATTTGAAAAGAAATTTAATAAGCGTCCATTAGTTTTGCCAACAGTAGTTGACTGTTATAAAACAAAATAA
Upstream 100 bases:
>100_bases TCTTTTAAAAAATTTATATTTATATCGATAAGATATAATAGAGTATAATTTAAGGATTAAAACACATATTATTTTACATT TTTATATATAAAGGAGCTTT
Downstream 100 bases:
>100_bases TTTTTAGAGGTAATGTATGGTTAGTGACAATAAAAACACATTAAATAAGGAAACAATTAGTTTTTATAGTTATGACAATC AACTAGATGCACAAAAAACA
Product: ATP/GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MAKINFLSLGGQDERGKSCFVLEVNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKNAKRVKGIFIGTPTFNNVMGIKL LLGQVGYKIPIYTSPIGAIVIKKIFEQKVNNKKIEPNIIELDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVY VDEFIISNDKNKTFDSQINLLNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYSIFT LATIAKQQNRPFIVYSNNFINTFIGVLKLKLFNSKNLISLPVSEINNSKNAIIVVIENQDTLFSKLNKILHNEDKYVNLS SDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKALPKTVLPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVT TSWIKSDQIISVSNGELFTIEDKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQFQKLFNY VEFDYCGVVNNDAQIKEIEETFKKRMGECLVYDERKRLILKDTKANLKRLLTKLFEKKFNKRPLVLPTVVDCYKTK
Sequences:
>Translated_556_residues MAKINFLSLGGQDERGKSCFVLEVNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKNAKRVKGIFIGTPTFNNVMGIKL LLGQVGYKIPIYTSPIGAIVIKKIFEQKVNNKKIEPNIIELDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVY VDEFIISNDKNKTFDSQINLLNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYSIFT LATIAKQQNRPFIVYSNNFINTFIGVLKLKLFNSKNLISLPVSEINNSKNAIIVVIENQDTLFSKLNKILHNEDKYVNLS SDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKALPKTVLPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVT TS*IKSDQIISVSNGELFTIEDKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQFQKLFNY VEFDYCGVVNNDAQIKEIEETFKKRMGECLVYDERKRLILKDTKANLKRLLTKLFEKKFNKRPLVLPTVVDCYKTK >Mature_555_residues AKINFLSLGGQDERGKSCFVLEVNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKNAKRVKGIFIGTPTFNNVMGIKLL LGQVGYKIPIYTSPIGAIVIKKIFEQKVNNKKIEPNIIELDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVYV DEFIISNDKNKTFDSQINLLNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYSIFTL ATIAKQQNRPFIVYSNNFINTFIGVLKLKLFNSKNLISLPVSEINNSKNAIIVVIENQDTLFSKLNKILHNEDKYVNLSS DDQLILGVVITPGFEMLAAELSDEVGRLDIPYKALPKTVLPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVTT S*IKSDQIISVSNGELFTIEDKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQFQKLFNYV EFDYCGVVNNDAQIKEIEETFKKRMGECLVYDERKRLILKDTKANLKRLLTKLFEKKFNKRPLVLPTVVDCYKTK
Specific function: Unknown
COG id: COG0595
COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004613 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62554; Mature: 62423
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKINFLSLGGQDERGKSCFVLEVNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKNAK CCEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECHHHHCCHH RVKGIFIGTPTFNNVMGIKLLLGQVGYKIPIYTSPIGAIVIKKIFEQKVNNKKIEPNIIE HEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEE LDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVYVDEFIISNDKNKTFDSQINL ECCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHH LNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYSIFT HHHCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEH LATIAKQQNRPFIVYSNNFINTFIGVLKLKLFNSKNLISLPVSEINNSKNAIIVVIENQD HEEHHHHCCCCEEEEECCHHHHHHHHHEEEEECCCCEEEEEHHHCCCCCCEEEEEECCCC TLFSKLNKILHNEDKYVNLSSDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKALPKTV HHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCC LPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVTTSIKSDQIISVSNGELFTIE CCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCEEEEECCCCCEEEECCCCEEEEE DKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQFQKLFNYV CCCCCCCCCEEEECHHHHCCCCHHHCCCCEEEEHHHCCCCCCEEEEEEECHHHHHHHHHH EFDYCGVVNNDAQIKEIEETFKKRMGECLVYDERKRLILKDTKANLKRLLTKLFEKKFNK CEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCC RPLVLPTVVDCYKTK CCEECHHHHHHHCCC >Mature Secondary Structure AKINFLSLGGQDERGKSCFVLEVNDDIFIFNAGAKIPTSDVFGVNMIVCDYSYLEKNAK CEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCEEEEEECHHHHCCHH RVKGIFIGTPTFNNVMGIKLLLGQVGYKIPIYTSPIGAIVIKKIFEQKVNNKKIEPNIIE HEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEE LDPISDKKIGSIYVTSFKVSNSMPHSYGFVLKTSDGAIVYVDEFIISNDKNKTFDSQINL ECCCCCCCCCEEEEEEEEECCCCCCCCEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHH LNNITKNNTLALIVGMGQAGNPYFTAPNHKNKAFYEAALQNTKNRLIVGCYSNDAYSIFT HHHCCCCCEEEEEEECCCCCCCCEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCEEEEH LATIAKQQNRPFIVYSNNFINTFIGVLKLKLFNSKNLISLPVSEINNSKNAIIVVIENQD HEEHHHHCCCCEEEEECCHHHHHHHHHEEEEECCCCEEEEEHHHCCCCCCEEEEEECCCC TLFSKLNKILHNEDKYVNLSSDDQLILGVVITPGFEMLAAELSDEVGRLDIPYKALPKTV HHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCC LPMTQSDEDLKHLINFLQPKFLIPINGLYKTEVKFSSTVTTSIKSDQIISVSNGELFTIE CCCCCCHHHHHHHHHHHCCEEEEEECCCEEEEEEECCEEEEECCCCCEEEECCCCEEEEE DKVLNPKPQIIELEDKYISSFDALDVGANILFERSQMGENGVINLIVIFDKQFQKLFNYV CCCCCCCCCEEEECHHHHCCCCHHHCCCCEEEEHHHCCCCCCEEEEEEECHHHHHHHHHH EFDYCGVVNNDAQIKEIEETFKKRMGECLVYDERKRLILKDTKANLKRLLTKLFEKKFNK CEEEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCC RPLVLPTVVDCYKTK CCEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8948633 [H]