Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
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Accession | NC_002162 |
Length | 751,719 |
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Identifier: 13358048
GI number: 13358048
Start: 577846
End: 579963
Strand: Reverse
Name: Not Available
Synonym: UU485
Alternate gene names: NA
Gene position: 579963-577846 (Counterclockwise)
Preceding gene: 13358049
Following gene: 13358046
Centisome position: 77.15
GC content: 22.14
Gene sequence:
>2118_bases ATGATAACTAAAAAACATTTAACTAAAATAATTACAATTTTAACTTGTAGTACTTTAATTATTGGTTTATCTTGCTTAAT TGGTGCATGCACTAAATCAAAAAGTAAGGTTGATGATAAACAAGTGCTTTTTAAAATAAAAAAATTTAAAACAACTACTA ATAGTATTGAGTTATTTTTAGAAGGTAGTGCAGTTTTAGCATCACATTCATACAGTGTTGTTTTAAAAGAAAAAGCAACT GGTGATTTAAAAACAATTAATAATTTAAAATTAGTTAAGGATAATGATCTTAATAAATTAATTATTAATGAATTAAAACC AAATATGGGTTATGAATTAGTAGATTTATTAATTAATAATCAAAAACAGCTAATAACTAAACTAGATTTTATAACAAGTA CATTAACACAAGAAAATGTAGATCAATTTAGTATAAAAAAAATTGATTGAAAAAATATTACTAATAATAGTGCTGATTTA AATTTAGAATTTACAAAATATTTTTTAGCGAACGAAAACCAAAATATTTTTGAGATTAGTTTATTAAATTTACAAACCCA ACAAATTACAAAATTTAAGTTTAATTATCAACCAAATTCGCCATCGATAACATTTAATTTTACTCAATTAGAAAACAACG CTAAATACCAAATTCATAGGATTGTTTTAAATAATAAAGAGTTAGTTTTTAGTAACCAAAATTTAGTATTATCTAATACT AATAAGCAAAACTCAAACCCGATTATTAAAGATTTAAACATCACCAAAATTGAAAAAGAAATTTATGATACTAGTGCAAA ATTGATTTTTTATTTTAAAGATAATAAGTTAGGTGATTTAAATAATCAAAAATTTGTTTTAAAATTAGTTTCAGCACACC AACCATCAAATACTTTTAGTTTTGAAAATTATGTTTACAATAACTCTAAAAAGACCTTATCATTTAATTTAACGGGTTTA CAAACTAGTACAAAATACTCATTAAATTCATTAACTCTTAATGGACAGCCAATATCATTAGCTAATTTAGATTTAAATAT TTTAACCTCTACAAAATTAACTACTGTTCAAAGATTAGAGAACTTAGAACATGAAAGCAGTGATTTTTGATTTAATGATG AAAATTTGAGTGTTAAGATTAAATTATATTTTGAAAATAACGTTAATTATTTAAAAAATAAATATTTAAAATTAGTATAC ATGGATAATGCAAATAACATCATTGTATCAAAACCTGTTTTATTTGATCCCACAAAAAAAGAGTACGAATTTAGTTTCGA TAAAGTTTTATCAAACCGAAAATACACTTTTTCTAAACTAGTTTTTGATGATCTACAAGATTTTAGTGAAAAACAAGCTT TAGAAGTAAATACTCAAGGATTAAATGGTAGTTTTAATACACCTCAAGCAAAAATTAAAATCAAAAAGATTTCTTATAGT TCAACCGATAAATCCGCTAAATTAGAGTTTCATTTAGAAGATGATTTTGATTTAGTTGATGGTGATAAAGTTAGTGTCAA ATATAGACTAAAACCATCATCTAATAGTATTGATACTACTAATAATACTGTTGAGGGTTTGGTTCATAACCACATATTGA ATGTAACAATTAATGATTTAGAATCAAATAAATCATATGAAGTTATTGACTTTGTTATTAATGATTATAAAAATAAACAA TTATTAAACAAACCTGAATTTTTAAAAAAAAATACAAATCATCATAACCATCCTTTTAATATCCCGCTTGATTTTGATAC TAAAAATAGTGATTATAAAACTAAATTTAATGTAAATGAAATTAGTAAATCTTATAATAAAGAAACTAAATTAACAACAA TCAAATTAAAATTTGATAATATTCCCACAAATCCCACTTCATCTAATAATTTTACATTTACAATTAAAAAACGAACAGGA TACACTACTAATCTGATAAGCCCAAAAACTTTGGAATATGATGTAAATAAGAAAACTTTAATAGCAAAATTTGAAAATAT TGAGGACCAAATTGTTTATGATTTTGTTGATGTTAAAGTAAATAATCAAAATATTGAATTTAACAAATCATTAGATAAGT ATTTTTCTATTATTCATAGTGCTGACTATCATGAATAA
Upstream 100 bases:
>100_bases GTAGATTAACAATAAAGTTTTAAAAATAGATTATTTATTGTATGATATAAAAGCTCAATTTGCTTTTTAATAGATAATTT CAAAAAAGGATTTATAAAAG
Downstream 100 bases:
>100_bases TTTTTATTTTGTCTTATTAATTAAATTTAGCATTTCATAAGCAATTTCGTGCTCTTCATTCACTAAACATAAATATATAG GAATTTGTGATTTAGATGTT
Product: membrane lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MITKKHLTKIITILTCSTLIIGLSCLIGACTKSKSKVDDKQVLFKIKKFKTTTNSIELFLEGSAVLASHSYSVVLKEKAT GDLKTINNLKLVKDNDLNKLIINELKPNMGYELVDLLINNQKQLITKLDFITSTLTQENVDQFSIKKIDWKNITNNSADL NLEFTKYFLANENQNIFEISLLNLQTQQITKFKFNYQPNSPSITFNFTQLENNAKYQIHRIVLNNKELVFSNQNLVLSNT NKQNSNPIIKDLNITKIEKEIYDTSAKLIFYFKDNKLGDLNNQKFVLKLVSAHQPSNTFSFENYVYNNSKKTLSFNLTGL QTSTKYSLNSLTLNGQPISLANLDLNILTSTKLTTVQRLENLEHESSDFWFNDENLSVKIKLYFENNVNYLKNKYLKLVY MDNANNIIVSKPVLFDPTKKEYEFSFDKVLSNRKYTFSKLVFDDLQDFSEKQALEVNTQGLNGSFNTPQAKIKIKKISYS STDKSAKLEFHLEDDFDLVDGDKVSVKYRLKPSSNSIDTTNNTVEGLVHNHILNVTINDLESNKSYEVIDFVINDYKNKQ LLNKPEFLKKNTNHHNHPFNIPLDFDTKNSDYKTKFNVNEISKSYNKETKLTTIKLKFDNIPTNPTSSNNFTFTIKKRTG YTTNLISPKTLEYDVNKKTLIAKFENIEDQIVYDFVDVKVNNQNIEFNKSLDKYFSIIHSADYHE
Sequences:
>Translated_705_residues MITKKHLTKIITILTCSTLIIGLSCLIGACTKSKSKVDDKQVLFKIKKFKTTTNSIELFLEGSAVLASHSYSVVLKEKAT GDLKTINNLKLVKDNDLNKLIINELKPNMGYELVDLLINNQKQLITKLDFITSTLTQENVDQFSIKKID*KNITNNSADL NLEFTKYFLANENQNIFEISLLNLQTQQITKFKFNYQPNSPSITFNFTQLENNAKYQIHRIVLNNKELVFSNQNLVLSNT NKQNSNPIIKDLNITKIEKEIYDTSAKLIFYFKDNKLGDLNNQKFVLKLVSAHQPSNTFSFENYVYNNSKKTLSFNLTGL QTSTKYSLNSLTLNGQPISLANLDLNILTSTKLTTVQRLENLEHESSDF*FNDENLSVKIKLYFENNVNYLKNKYLKLVY MDNANNIIVSKPVLFDPTKKEYEFSFDKVLSNRKYTFSKLVFDDLQDFSEKQALEVNTQGLNGSFNTPQAKIKIKKISYS STDKSAKLEFHLEDDFDLVDGDKVSVKYRLKPSSNSIDTTNNTVEGLVHNHILNVTINDLESNKSYEVIDFVINDYKNKQ LLNKPEFLKKNTNHHNHPFNIPLDFDTKNSDYKTKFNVNEISKSYNKETKLTTIKLKFDNIPTNPTSSNNFTFTIKKRTG YTTNLISPKTLEYDVNKKTLIAKFENIEDQIVYDFVDVKVNNQNIEFNKSLDKYFSIIHSADYHE >Mature_705_residues MITKKHLTKIITILTCSTLIIGLSCLIGACTKSKSKVDDKQVLFKIKKFKTTTNSIELFLEGSAVLASHSYSVVLKEKAT GDLKTINNLKLVKDNDLNKLIINELKPNMGYELVDLLINNQKQLITKLDFITSTLTQENVDQFSIKKID*KNITNNSADL NLEFTKYFLANENQNIFEISLLNLQTQQITKFKFNYQPNSPSITFNFTQLENNAKYQIHRIVLNNKELVFSNQNLVLSNT NKQNSNPIIKDLNITKIEKEIYDTSAKLIFYFKDNKLGDLNNQKFVLKLVSAHQPSNTFSFENYVYNNSKKTLSFNLTGL QTSTKYSLNSLTLNGQPISLANLDLNILTSTKLTTVQRLENLEHESSDF*FNDENLSVKIKLYFENNVNYLKNKYLKLVY MDNANNIIVSKPVLFDPTKKEYEFSFDKVLSNRKYTFSKLVFDDLQDFSEKQALEVNTQGLNGSFNTPQAKIKIKKISYS STDKSAKLEFHLEDDFDLVDGDKVSVKYRLKPSSNSIDTTNNTVEGLVHNHILNVTINDLESNKSYEVIDFVINDYKNKQ LLNKPEFLKKNTNHHNHPFNIPLDFDTKNSDYKTKFNVNEISKSYNKETKLTTIKLKFDNIPTNPTSSNNFTFTIKKRTG YTTNLISPKTLEYDVNKKTLIAKFENIEDQIVYDFVDVKVNNQNIEFNKSLDKYFSIIHSADYHE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80939; Mature: 80939
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKKHLTKIITILTCSTLIIGLSCLIGACTKSKSKVDDKQVLFKIKKFKTTTNSIELFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE EGSAVLASHSYSVVLKEKATGDLKTINNLKLVKDNDLNKLIINELKPNMGYELVDLLINN ECCEEEEECCEEEEEEECCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHCC QKQLITKLDFITSTLTQENVDQFSIKKIDKNITNNSADLNLEFTKYFLANENQNIFEISL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEEEE LNLQTQQITKFKFNYQPNSPSITFNFTQLENNAKYQIHRIVLNNKELVFSNQNLVLSNTN EECCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCEEEECCC KQNSNPIIKDLNITKIEKEIYDTSAKLIFYFKDNKLGDLNNQKFVLKLVSAHQPSNTFSF CCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEE ENYVYNNSKKTLSFNLTGLQTSTKYSLNSLTLNGQPISLANLDLNILTSTKLTTVQRLEN EEEEEECCCEEEEEEEEEECCCCEEEEEEEEECCCCEEEEECEEEEEECCHHHHHHHHHH LEHESSDFFNDENLSVKIKLYFENNVNYLKNKYLKLVYMDNANNIIVSKPVLFDPTKKEY CCCCCCCCCCCCCCEEEEEEEECCCCCHHCCCEEEEEEEECCCCEEEECCEEECCCCCHH EFSFDKVLSNRKYTFSKLVFDDLQDFSEKQALEVNTQGLNGSFNTPQAKIKIKKISYSST CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCC DKSAKLEFHLEDDFDLVDGDKVSVKYRLKPSSNSIDTTNNTVEGLVHNHILNVTINDLES CCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCCCCCHHHHHEECEEEEEEEECCCC NKSYEVIDFVINDYKNKQLLNKPEFLKKNTNHHNHPFNIPLDFDTKNSDYKTKFNVNEIS CCCEEEEEEECCCCCCCHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECHHHHH KSYNKETKLTTIKLKFDNIPTNPTSSNNFTFTIKKRTGYTTNLISPKTLEYDVNKKTLIA HHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCEEEEE KFENIEDQIVYDFVDVKVNNQNIEFNKSLDKYFSIIHSADYHE ECCCCCCEEEEEEEEEEECCCCEEECCCHHHHHHHHHCCCCCC >Mature Secondary Structure MITKKHLTKIITILTCSTLIIGLSCLIGACTKSKSKVDDKQVLFKIKKFKTTTNSIELFL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE EGSAVLASHSYSVVLKEKATGDLKTINNLKLVKDNDLNKLIINELKPNMGYELVDLLINN ECCEEEEECCEEEEEEECCCCCCEECCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHCC QKQLITKLDFITSTLTQENVDQFSIKKIDKNITNNSADLNLEFTKYFLANENQNIFEISL CHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCEEEEEE LNLQTQQITKFKFNYQPNSPSITFNFTQLENNAKYQIHRIVLNNKELVFSNQNLVLSNTN EECCCCEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEEECCCEEEECCC KQNSNPIIKDLNITKIEKEIYDTSAKLIFYFKDNKLGDLNNQKFVLKLVSAHQPSNTFSF CCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCEE ENYVYNNSKKTLSFNLTGLQTSTKYSLNSLTLNGQPISLANLDLNILTSTKLTTVQRLEN EEEEEECCCEEEEEEEEEECCCCEEEEEEEEECCCCEEEEECEEEEEECCHHHHHHHHHH LEHESSDFFNDENLSVKIKLYFENNVNYLKNKYLKLVYMDNANNIIVSKPVLFDPTKKEY CCCCCCCCCCCCCCEEEEEEEECCCCCHHCCCEEEEEEEECCCCEEEECCEEECCCCCHH EFSFDKVLSNRKYTFSKLVFDDLQDFSEKQALEVNTQGLNGSFNTPQAKIKIKKISYSST CCCHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEEECCCC DKSAKLEFHLEDDFDLVDGDKVSVKYRLKPSSNSIDTTNNTVEGLVHNHILNVTINDLES CCCEEEEEEECCCCCEECCCEEEEEEEECCCCCCCCCCCCHHHHHEECEEEEEEEECCCC NKSYEVIDFVINDYKNKQLLNKPEFLKKNTNHHNHPFNIPLDFDTKNSDYKTKFNVNEIS CCCEEEEEEECCCCCCCHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECHHHHH KSYNKETKLTTIKLKFDNIPTNPTSSNNFTFTIKKRTGYTTNLISPKTLEYDVNKKTLIA HHCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCEEEEE KFENIEDQIVYDFVDVKVNNQNIEFNKSLDKYFSIIHSADYHE ECCCCCCEEEEEEEEEEECCCCEEECCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA