| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is ureB
Identifier: 13357996
GI number: 13357996
Start: 495436
End: 495810
Strand: Reverse
Name: ureB
Synonym: UU433
Alternate gene names: 13357996
Gene position: 495810-495436 (Counterclockwise)
Preceding gene: 13357997
Following gene: 13357995
Centisome position: 65.96
GC content: 34.67
Gene sequence:
>375_bases ATGTCAGGATCATCAAGTCAATTTAGTCCAGGTAAATTAGTACCAGGGGCAATTAATTTCGCTAGTGGTGAAATTGTGAT GAATGAAGGTAGAGAGGCAAAAGTAATTAGTATTAAAAATACTGGGGACCGTCCTATACAAGTTGGATCACATTTTCACT TGTTTGAAGTGAATAGTGCATTAGTATTTTTTGATGAAAAAGGAAATGAAGATAAAGAACGCAAAGTTGCTTATGGACGA CGTTTCGATATTCCATCAGGTACTGCTATTCGTTTTGAACCAGGAGATAAAAAAGAAGTTTCAATTATTGATTTAGCCGG AACACGCGAAGTTTGAGGTGTAAATGGCTTAGTTAATGGAAAACTTAAAAAATAA
Upstream 100 bases:
>100_bases ACTTTCCCTGATGGTACTAAACTAGTTTCTGTACACGATCCAATTTACAAATAACATTTACAATTCGTAAAATTTTTTTA TAAAAGGAGATAATGATTAT
Downstream 100 bases:
>100_bases AACTCTATTTTACAAGTTTCTACTATAGATAAAAAGGGGAACATTATGTTTAAAATTTCAAGAAAAAATTATTCAGATTT ATACGGTATTACAACTGGTG
Product: urease complex component
Products: NA
Alternate protein names: Urea amidohydrolase subunit beta [H]
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGR RFDIPSGTAIRFEPGDKKEVSIIDLAGTREVWGVNGLVNGKLKK
Sequences:
>Translated_124_residues MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGR RFDIPSGTAIRFEPGDKKEVSIIDLAGTREV*GVNGLVNGKLKK >Mature_123_residues SGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSALVFFDEKGNEDKERKVAYGRR FDIPSGTAIRFEPGDKKEVSIIDLAGTREV*GVNGLVNGKLKK
Specific function: Unknown
COG id: COG0832
COG function: function code E; Urea amidohydrolase (urease) beta subunit
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the urease beta subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002019 [H]
Pfam domain/function: PF00699 Urease_beta [H]
EC number: =3.5.1.5 [H]
Molecular weight: Translated: 13305; Mature: 13174
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSA CCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCEEEECCEEEEEEECCE LVFFDEKGNEDKERKVAYGRRFDIPSGTAIRFEPGDKKEVSIIDLAGTREVGVNGLVNGK EEEEECCCCCCCHHEEECCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEECCE LKK ECC >Mature Secondary Structure SGSSSQFSPGKLVPGAINFASGEIVMNEGREAKVISIKNTGDRPIQVGSHFHLFEVNSA CCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEECCCCCEEEECCEEEEEEECCE LVFFDEKGNEDKERKVAYGRRFDIPSGTAIRFEPGDKKEVSIIDLAGTREVGVNGLVNGK EEEEECCCCCCCHHEEECCEEECCCCCCEEEECCCCCCEEEEEEECCCCCCCCCEEECCE LKK ECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10555372 [H]