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The map label for this gene is ureD

Identifier: 13357991

GI number: 13357991

Start: 490811

End: 491674

Strand: Reverse

Name: ureD

Synonym: UU428

Alternate gene names: 13357991

Gene position: 491674-490811 (Counterclockwise)

Preceding gene: 13357992

Following gene: 13357990

Centisome position: 65.41

GC content: 27.89

Gene sequence:

>864_bases
ATGATTTTAAATAAAGAAAAAATTAAAAATTATGCTGCTTATTTATACATTAAAGTAGCATATGATCAAGCTCATTCAAA
AATGGCACATACTGTCTATTTTACGAATTTTTATCGTTCATCTAAACCTTTATTTTTAGATGAAGAAGATCCAATCAACC
CCTGTTTTCAAACAATTAGTATGGGTGGTGGATATGTTTCAGGTGAAATTTATCGTTCTGATTTTGAAATTAATGATGAT
GCTCGTTGTATCATTACAACACAATCCTCAGCTAAAGCTTATAAAACGGTTGATGGAAAAACTTCTGAGCAACATACAAA
TATCACGTTAGGAAAAAATAGTATTTTAGAATATATAAGTGATAACGTAATTGTTTATGAAGATGGAAAGTTCGCACAAT
TTAATAATTTTAAAATGGATTCAAGTGCTACTTTAATTTACACAGAATGTTTTGGCCCTGGTTGATCGCCACATGGGTCT
GCTTATCAATACGAAAAAATGTATTTAAATACTAAAATATATTATGATGATAAATTGGTTTTATTTGATAATTTAAAATT
TCAACCACGTAAAAATGATGAATCAGCATTTGGAATCATGGATGGCTATCATTATTGTGGAACCATGATTGTAATTAATC
AACAAGTTATTGAAGATGATGTTATTAAAATTCGTGATTTAGTTAAGGAAAAATATCCTGACATGGATATGATATTTGGT
GTATCACGTATGGATATTCCTGGTTTGGGATTACGAGTTTTAGCTAATACTTATTATCATGTTGAAAAAATTAATGCTGT
TGCTCATGATTATTTTAGAAGAAAATTATTCAATAAAAAACCTTTAATTTTACGAAAACCATAA

Upstream 100 bases:

>100_bases
CTTTGTAACGAATTTAAAAACAGATGAAGGTTTAAAATCTGTTGCTGATTGAATTGAAAAGCGTTTGCAATTAGCTTTAC
TAGAAGAATAAAGTTAACAA

Downstream 100 bases:

>100_bases
AAGATTTAAAAAACCTTAAAACGTTAAGTTTTAAGGTTTTTATTTCTTATAAATTGTTAAATAATTATATAATATATATG
AATTAGGCCACAAGGAGGAT

Product: urease complex component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MILNKEKIKNYAAYLYIKVAYDQAHSKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEIYRSDFEINDD
ARCIITTQSSAKAYKTVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSSATLIYTECFGPGWSPHGS
AYQYEKMYLNTKIYYDDKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQQVIEDDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP

Sequences:

>Translated_287_residues
MILNKEKIKNYAAYLYIKVAYDQAHSKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEIYRSDFEINDD
ARCIITTQSSAKAYKTVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSSATLIYTECFGPG*SPHGS
AYQYEKMYLNTKIYYDDKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQQVIEDDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
>Mature_287_residues
MILNKEKIKNYAAYLYIKVAYDQAHSKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTISMGGGYVSGEIYRSDFEINDD
ARCIITTQSSAKAYKTVDGKTSEQHTNITLGKNSILEYISDNVIVYEDGKFAQFNNFKMDSSATLIYTECFGPG*SPHGS
AYQYEKMYLNTKIYYDDKLVLFDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQQVIEDDVIKIRDLVKEKYPDMDMIFG
VSRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002669 [H]

Pfam domain/function: PF01774 UreD [H]

EC number: NA

Molecular weight: Translated: 33043; Mature: 33043

Theoretical pI: Translated: 7.17; Mature: 7.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNKEKIKNYAAYLYIKVAYDQAHSKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTIS
CCCCHHHHHCEEEEEEEEEEECHHCCHHEEEEEEEEHCCCCCCEEECCCCCCCHHHHHHH
MGGGYVSGEIYRSDFEINDDARCIITTQSSAKAYKTVDGKTSEQHTNITLGKNSILEYIS
CCCCEEECEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEECHHHHHHHHC
DNVIVYEDGKFAQFNNFKMDSSATLIYTECFGPGSPHGSAYQYEKMYLNTKIYYDDKLVL
CCEEEEECCCEEEECCEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCEEEE
FDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQQVIEDDVIKIRDLVKEKYPDMDMIFGV
EECCEECCCCCCCCEEEECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
SRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC
>Mature Secondary Structure
MILNKEKIKNYAAYLYIKVAYDQAHSKMAHTVYFTNFYRSSKPLFLDEEDPINPCFQTIS
CCCCHHHHHCEEEEEEEEEEECHHCCHHEEEEEEEEHCCCCCCEEECCCCCCCHHHHHHH
MGGGYVSGEIYRSDFEINDDARCIITTQSSAKAYKTVDGKTSEQHTNITLGKNSILEYIS
CCCCEEECEEEECCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCEEEECHHHHHHHHC
DNVIVYEDGKFAQFNNFKMDSSATLIYTECFGPGSPHGSAYQYEKMYLNTKIYYDDKLVL
CCEEEEECCCEEEECCEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEEEEEEECCEEEE
FDNLKFQPRKNDESAFGIMDGYHYCGTMIVINQQVIEDDVIKIRDLVKEKYPDMDMIFGV
EECCEECCCCCCCCEEEECCCHHHHCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHCCC
SRMDIPGLGLRVLANTYYHVEKINAVAHDYFRRKLFNKKPLILRKP
CCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA