| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357990
GI number: 13357990
Start: 490192
End: 490704
Strand: Reverse
Name: Not Available
Synonym: UU427
Alternate gene names: NA
Gene position: 490704-490192 (Counterclockwise)
Preceding gene: 13357991
Following gene: 13357987
Centisome position: 65.28
GC content: 26.71
Gene sequence:
>513_bases ATGGTTAAATCTCAAAAAGTTATAGATGTTTTAAATACACATTATAATTTAAATTTAGAACTAGGTAGTATTTATGCACA ATATGCTCATATTGCTGATGACCAATTCAGTATGCCTTTTTTAGCAAAATTTATTGCTGATTTAAGCAATGATAAATTAG GTGTTCACAAGAATTTAATTTCTGAATATGCTCGTAAAGTTGAAATTCCATTACACACTAAATTTAGTGTAGATGTTAAT TTTAAGCCAGCGAATCCTAAGGAATTAATAAAACACATTTTAGATACAGAATTAAAAGTTCGTAAGCATGTAGCCAATAT GGCAAAAGTATGTTTGGAAGAAAATGATTTTGAAACATTTAGTTTTGTAAAATGATTTGTTGATGATGGTATTAAAGATT TTGATGATGTTCGTACCATCCATGATTTCTTTGAAAATGCTACTAATAATTTGCAAGTTGAATATGCCATTCGTAAATAT TTAAAGCAAATGAAAGTTGAAGAAGAAAAATAA
Upstream 100 bases:
>100_bases TAAAAAACCTTAAAACGTTAAGTTTTAAGGTTTTTATTTCTTATAAATTGTTAAATAATTATATAATATATATGAATTAG GCCACAAGGAGGATTTTTAA
Downstream 100 bases:
>100_bases TTTAATTATATATTAAACAATAAAAACCATTTATAAGGTTATAAAAATACTTATAAATGGTTTTTAATTTTCTATTAGTT TTTAAACTAATTGATTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MVKSQKVIDVLNTHYNLNLELGSIYAQYAHIADDQFSMPFLAKFIADLSNDKLGVHKNLISEYARKVEIPLHTKFSVDVN FKPANPKELIKHILDTELKVRKHVANMAKVCLEENDFETFSFVKWFVDDGIKDFDDVRTIHDFFENATNNLQVEYAIRKY LKQMKVEEEK
Sequences:
>Translated_170_residues MVKSQKVIDVLNTHYNLNLELGSIYAQYAHIADDQFSMPFLAKFIADLSNDKLGVHKNLISEYARKVEIPLHTKFSVDVN FKPANPKELIKHILDTELKVRKHVANMAKVCLEENDFETFSFVK*FVDDGIKDFDDVRTIHDFFENATNNLQVEYAIRKY LKQMKVEEEK >Mature_170_residues MVKSQKVIDVLNTHYNLNLELGSIYAQYAHIADDQFSMPFLAKFIADLSNDKLGVHKNLISEYARKVEIPLHTKFSVDVN FKPANPKELIKHILDTELKVRKHVANMAKVCLEENDFETFSFVK*FVDDGIKDFDDVRTIHDFFENATNNLQVEYAIRKY LKQMKVEEEK
Specific function: Unknown
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19680; Mature: 19680
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00136 SUBTILASE_ASP ; PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSQKVIDVLNTHYNLNLELGSIYAQYAHIADDQFSMPFLAKFIADLSNDKLGVHKNLI CCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH SEYARKVEIPLHTKFSVDVNFKPANPKELIKHILDTELKVRKHVANMAKVCLEENDFETF HHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHH SFVKFVDDGIKDFDDVRTIHDFFENATNNLQVEYAIRKYLKQMKVEEEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVKSQKVIDVLNTHYNLNLELGSIYAQYAHIADDQFSMPFLAKFIADLSNDKLGVHKNLI CCCCHHHHHHHHCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHH SEYARKVEIPLHTKFSVDVNFKPANPKELIKHILDTELKVRKHVANMAKVCLEENDFETF HHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCHH SFVKFVDDGIKDFDDVRTIHDFFENATNNLQVEYAIRKYLKQMKVEEEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11048724 [H]