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The map label for this gene is tnp-2

Identifier: 13357965

GI number: 13357965

Start: 464668

End: 465474

Strand: Reverse

Name: tnp-2

Synonym: UU404

Alternate gene names: NA

Gene position: 465474-464668 (Counterclockwise)

Preceding gene: 13357966

Following gene: 13357963

Centisome position: 61.92

GC content: 21.19

Gene sequence:

>807_bases
ATGGACAAAAAGAATATTTTTACAATTCTAGAGAAGTTAGTTAAAAAATACAAGTATTTGCACAAACCAATTCTAGATGA
CTATATTAGTACTTTTACAAGAACCTTTTTAGAATATATATTGACAATCGAAATGAAATATCATTTAAATTATGAACGTT
TTGAACGTTATTTAAGTAGTAATTCTAAAAACTATCGTAATGGTTTTTCTAAAAAACAACTGTATATGAACGATTTAAAA
GTTTCAATTAATATTCCACGTGATCGTAATGGAGCTTTTGAATCAAAAATTATTTCAAAATACCAAGTTGATATTTCACA
TTTTGAATATCGCTTATTATCGTTGGGAATCAATAATTTACAATTAAATGAATATGAAAAAATATTAGAAGATATTTATA
ATATTTATAATGACAAAATGGTTGATAAACTATGTAATGAAATTGCTTTAAAAATTTTTGATTATTTAGAGAATAAAAAA
CAAGAACTAAATAATATAGATGTTGATCAAATTTTTATCGATGGTTTTAATTTATCATCAAATAAATGATTAACAATCGT
AATTACTAAAGATTTAGAAAAGCGTTTAACAATTTTAGGTTTTTGAGTTATTAATAATTTAGAAGACAAATGATGAAATG
ATATTATTATAAAAATTTCAAAATATCATCCACAAGTAATTAATTATAAAGTTATTTTTAAAGATAATGATGAACTGTTA
ATGTCTTTAAAAAATCATACTTCTAATAATTTTGAGCGTGCTCGTTTTGTTTTTATTAATAAATCTATCTTAAACCAAAA
AAACTAG

Upstream 100 bases:

>100_bases
ACACTAAGTCAAAAGATAATCTTAGTGATGTTAATAAATAATATTATTAATTAACAATGAATCTATTTTAAACATTGTTA
TTTTGCAATGGAGTTTTTTT

Downstream 100 bases:

>100_bases
TATTGCATAATCAATTCCTCTTAAATCACGACATTTCTTTATCCAATTATTTTATATTATATATATATATATATAGAAAG
TCAACTAAAAAATAAGTTTA

Product: integrase-recombinase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDKKNIFTILEKLVKKYKYLHKPILDDYISTFTRTFLEYILTIEMKYHLNYERFERYLSSNSKNYRNGFSKKQLYMNDLK
VSINIPRDRNGAFESKIISKYQVDISHFEYRLLSLGINNLQLNEYEKILEDIYNIYNDKMVDKLCNEIALKIFDYLENKK
QELNNIDVDQIFIDGFNLSSNKWLTIVITKDLEKRLTILGFWVINNLEDKWWNDIIIKISKYHPQVINYKVIFKDNDELL
MSLKNHTSNNFERARFVFINKSILNQKN

Sequences:

>Translated_268_residues
MDKKNIFTILEKLVKKYKYLHKPILDDYISTFTRTFLEYILTIEMKYHLNYERFERYLSSNSKNYRNGFSKKQLYMNDLK
VSINIPRDRNGAFESKIISKYQVDISHFEYRLLSLGINNLQLNEYEKILEDIYNIYNDKMVDKLCNEIALKIFDYLENKK
QELNNIDVDQIFIDGFNLSSNK*LTIVITKDLEKRLTILGF*VINNLEDK**NDIIIKISKYHPQVINYKVIFKDNDELL
MSLKNHTSNNFERARFVFINKSILNQKN
>Mature_268_residues
MDKKNIFTILEKLVKKYKYLHKPILDDYISTFTRTFLEYILTIEMKYHLNYERFERYLSSNSKNYRNGFSKKQLYMNDLK
VSINIPRDRNGAFESKIISKYQVDISHFEYRLLSLGINNLQLNEYEKILEDIYNIYNDKMVDKLCNEIALKIFDYLENKK
QELNNIDVDQIFIDGFNLSSNK*LTIVITKDLEKRLTILGF*VINNLEDK**NDIIIKISKYHPQVINYKVIFKDNDELL
MSLKNHTSNNFERARFVFINKSILNQKN

Specific function: Required for the transposition of the insertion element [H]

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 31595; Mature: 31595

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKNIFTILEKLVKKYKYLHKPILDDYISTFTRTFLEYILTIEMKYHLNYERFERYLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHC
NSKNYRNGFSKKQLYMNDLKVSINIPRDRNGAFESKIISKYQVDISHFEYRLLSLGINNL
CCCHHHCCCCHHHEEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLNEYEKILEDIYNIYNDKMVDKLCNEIALKIFDYLENKKQELNNIDVDQIFIDGFNLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC
NKLTIVITKDLEKRLTILGFVINNLEDKNDIIIKISKYHPQVINYKVIFKDNDELLMSLK
CCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHH
NHTSNNFERARFVFINKSILNQKN
HCCCCCCCCEEEEEEEHHHCCCCC
>Mature Secondary Structure
MDKKNIFTILEKLVKKYKYLHKPILDDYISTFTRTFLEYILTIEMKYHLNYERFERYLSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHC
NSKNYRNGFSKKQLYMNDLKVSINIPRDRNGAFESKIISKYQVDISHFEYRLLSLGINNL
CCCHHHCCCCHHHEEEECEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
QLNEYEKILEDIYNIYNDKMVDKLCNEIALKIFDYLENKKQELNNIDVDQIFIDGFNLSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCC
NKLTIVITKDLEKRLTILGFVINNLEDKNDIIIKISKYHPQVINYKVIFKDNDELLMSLK
CCEEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEEEECCHHHHHHHH
NHTSNNFERARFVFINKSILNQKN
HCCCCCCCCEEEEEEEHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]