| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 13357939
GI number: 13357939
Start: 436307
End: 436858
Strand: Reverse
Name: Not Available
Synonym: UU379
Alternate gene names: NA
Gene position: 436858-436307 (Counterclockwise)
Preceding gene: 13357940
Following gene: 13357936
Centisome position: 58.11
GC content: 21.01
Gene sequence:
>552_bases ATGTCAAAAAACCCTTATGTAATTAATGAATGATTTATGGCTAACGTGATTCATAATATCAAAGAATTACAAACGTTAAC CATTAACAAAAAAATTAAAATTAAAGATTTTGATTACTTATCTTATTTACCTTTGGTAAAAGATGATCCATTAGCTTCAT ATTTTAAATCTATTTATGAACAAGAAGTAAAAAGAACTAAACTTGTTTTGGCTCACAATGATTTTTCAATTAATAACATT TTAGCAAATGAATGCGAAAATCTTTTTATATTAATTGATTTTGAATATAGTAGTAGAAATTTAAAAGATTGAGATTTATT TAATTTTTTAAGAGATCTCAATGATGTCCAATTAAATTTTGGAATTTCTTTTATAAAAGAAAAATTAGGATATGACGAAT GCTTGATTTATAAATACTTATTTTTAACATCATATTATGGTTTTTTATGAGCTACAAACGCTTTTTTAAAAACTAATGAA TTAAAAATTAAGATATATGGCGAAAATGCTTATCAAAAAGCTGATTTTTATTTACAAAAATTAAATAAATAA
Upstream 100 bases:
>100_bases AAAAAGGGAAATACTTTAGAGCATTATTTGTTTACTAAATTTTTCAAAGGTTATTTTTATTATGATCAACAATCTCATCA CCTAATTAGTCAAAAAATAA
Downstream 100 bases:
>100_bases TAAAAAATCCATCTTTGTTATAAACATAATAAGACGGATTTTTTATTGTATTATAATCTTTATCTTTATTAATTAAAAAT TAATGTAAATCTTTTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSKNPYVINEWFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNI LANECENLFILIDFEYSSRNLKDWDLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFLWATNAFLKTNE LKIKIYGENAYQKADFYLQKLNK
Sequences:
>Translated_183_residues MSKNPYVINE*FMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNI LANECENLFILIDFEYSSRNLKD*DLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFL*ATNAFLKTNE LKIKIYGENAYQKADFYLQKLNK >Mature_182_residues SKNPYVINE*FMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQEVKRTKLVLAHNDFSINNIL ANECENLFILIDFEYSSRNLKD*DLFNFLRDLNDVQLNFGISFIKEKLGYDECLIYKYLFLTSYYGFL*ATNAFLKTNEL KIKIYGENAYQKADFYLQKLNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21293; Mature: 21162
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNPYVINEFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQ CCCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH EVKRTKLVLAHNDFSINNILANECENLFILIDFEYSSRNLKDDLFNFLRDLNDVQLNFGI HHHHHEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCH SFIKEKLGYDECLIYKYLFLTSYYGFLATNAFLKTNELKIKIYGENAYQKADFYLQKLNK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHCC >Mature Secondary Structure SKNPYVINEFMANVIHNIKELQTLTINKKIKIKDFDYLSYLPLVKDDPLASYFKSIYEQ CCCCCHHHHHHHHHHHHHHHHHEEEECCEEEEECCCHHHHCCCCCCCHHHHHHHHHHHH EVKRTKLVLAHNDFSINNILANECENLFILIDFEYSSRNLKDDLFNFLRDLNDVQLNFGI HHHHHEEEEEECCCCHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCEEECCCH SFIKEKLGYDECLIYKYLFLTSYYGFLATNAFLKTNELKIKIYGENAYQKADFYLQKLNK HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA