| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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The map label for this gene is MBA
Identifier: 13357935
GI number: 13357935
Start: 427313
End: 428560
Strand: Reverse
Name: MBA
Synonym: UU375
Alternate gene names: 13357935
Gene position: 428560-427313 (Counterclockwise)
Preceding gene: 13357936
Following gene: 13357934
Centisome position: 57.01
GC content: 38.3
Gene sequence:
>1248_bases ATGAAATTATTAAAAAATAAAAAATTCTGAGCTATGACATTAGGTGTTACCTTAGTTGGAGCTGGAATAGTTGCTATAGC AGCTTCATGTTCTAATTCAACTGTTAAATCTAAGTTAAGTAACCAATTTGCTAAATCAACAGACGGTAAAAGTTTTTATG CGGTTTACGAAATTGAAAACTTTAAAGATCTAAGTAATGATGATAAAAAATCATTAAGTAACATTGAATTTAATGCTGCA CTTACATCAGCTGAAAACAAAACAGAAAGTACACTTGAAAAAGGTCATTTAGTTGGTGAAAAAATTTACGTTAAATTACC TCGTGAACCAAAACCTAATGAACAATTAACTATTATTAGTAAAAGTGGATTAATCAAGACTTCAGGTTTGTTAATATCTG ATAATTTGAATTATCAAACAGAAAAAGTGAACTTTGAAACTACACAACCAGGTAAAGAACAACCAGCAGGTAAAGAACAA CCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGG TAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAAC AACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCA GGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGA ACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAG CAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAA GAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACC AGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTA AAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAACCAGCAGGTAAAGAACAA CCAGCAGGTAAAGAACAACCAGCAGGTAAAGAAACTACTGGAAAATAA
Upstream 100 bases:
>100_bases AGAAATTATGTAAGATTACCAAATCTTAGTGTTCATATTTTTTACATATATTAAATAAAAACAATAAAATGACATATTTT TTATATTAGGAGAATCATAA
Downstream 100 bases:
>100_bases TTACTTTAGTTAAAAAATAAAATTTAAATTAAATAGCTCAAAAAATTGAGCTATTTTTTATTATTTTAAAACTGATAATT TTCAGAATTTAAATTTTAGT
Product: multiple banded antigen
Products: NA
Alternate protein names: Outer layer protein B; S-layer protein 1 [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKLLKNKKFWAMTLGVTLVGAGIVAIAASCSNSTVKSKLSNQFAKSTDGKSFYAVYEIENFKDLSNDDKKSLSNIEFNAA LTSAENKTESTLEKGHLVGEKIYVKLPREPKPNEQLTIISKSGLIKTSGLLISDNLNYQTEKVNFETTQPGKEQPAGKEQ PAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPA GKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGK EQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQ PAGKEQPAGKETTGK
Sequences:
>Translated_415_residues MKLLKNKKF*AMTLGVTLVGAGIVAIAASCSNSTVKSKLSNQFAKSTDGKSFYAVYEIENFKDLSNDDKKSLSNIEFNAA LTSAENKTESTLEKGHLVGEKIYVKLPREPKPNEQLTIISKSGLIKTSGLLISDNLNYQTEKVNFETTQPGKEQPAGKEQ PAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPA GKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGK EQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQ PAGKEQPAGKETTGK >Mature_415_residues MKLLKNKKF*AMTLGVTLVGAGIVAIAASCSNSTVKSKLSNQFAKSTDGKSFYAVYEIENFKDLSNDDKKSLSNIEFNAA LTSAENKTESTLEKGHLVGEKIYVKLPREPKPNEQLTIISKSGLIKTSGLLISDNLNYQTEKVNFETTQPGKEQPAGKEQ PAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPA GKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGK EQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQ PAGKEQPAGKETTGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall, S-layer [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 SLH (S-layer homology) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008965 - InterPro: IPR002102 - InterPro: IPR018452 - InterPro: IPR001119 [H]
Pfam domain/function: PF00963 Cohesin; PF00395 SLH [H]
EC number: NA
Molecular weight: Translated: 43252; Mature: 43252
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKNKKFAMTLGVTLVGAGIVAIAASCSNSTVKSKLSNQFAKSTDGKSFYAVYEIENF CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCC KDLSNDDKKSLSNIEFNAALTSAENKTESTLEKGHLVGEKIYVKLPREPKPNEQLTIISK HHCCCHHHHHHHCEEEHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEC SGLIKTSGLLISDNLNYQTEKVNFETTQPGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCEEEECCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKETTGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLLKNKKFAMTLGVTLVGAGIVAIAASCSNSTVKSKLSNQFAKSTDGKSFYAVYEIENF CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCC KDLSNDDKKSLSNIEFNAALTSAENKTESTLEKGHLVGEKIYVKLPREPKPNEQLTIISK HHCCCHHHHHHHCEEEHHEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEC SGLIKTSGLLISDNLNYQTEKVNFETTQPGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCEEEECCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKEQPAGKETTGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8458832 [H]