| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357885
GI number: 13357885
Start: 371753
End: 372412
Strand: Reverse
Name: Not Available
Synonym: UU325
Alternate gene names: 13357885
Gene position: 372412-371753 (Counterclockwise)
Preceding gene: 13357891
Following gene: 13357884
Centisome position: 49.54
GC content: 25.91
Gene sequence:
>660_bases ATGGATTTATGAAAAGAACAAGATGAAAATGGAATTAGCCCTAATGTATCTAACGAACGAAAAGTAGTAGTTGCTTCAAA TGGCGAAAAAACTTTATATATTTTCATCATAGTTATTTCAATTATTTCAATTATTGGTTGAATCTTTTTATTAGTTTGAT GATTTAATACTAAAAATCATTTAATTCAAACTAAAAACAGTGTTAATGAAGCTTCATCAAGCATCCAAGTAGCACAAACA AAACGGTTCGATTTATTAAATAAAATGATTGAACAAACTAAATCATATTACAAATATGAAGAAAAAGTATTAGATGAAAT AACTAAAAATCGAAGTATTCAAATGTCAAATGATATTAACAAAAATGAAGAAGTATTAAATAAACTTCAAAATTTAGTTA ATGTTCAATTCGAACGTTATCCAGATTTGAAATCATCCAATATTTTAATGGAATTGATGAGTACATCAAGTTATTTAGAA AATGAAATTGCTTCATCACGACGTGCTTATAACTCACGTGCAACTGATTGAAATATTATGATTTTTCAATTTATGACTGT TATCGTTGCTGAAAAATTAAAACTTGAAACTTTCCCAATTTATGCTGCAAACAAACAAGAGCGTAAAGATGTAGATATGA AATCACTGTCAGATTTTTAA
Upstream 100 bases:
>100_bases ATTTTTAACATACTAAGCATGTTAGAAAAATTTTTACTATTTTTATATTATATAATTTTAATTGATTATTAAAATCATTT AATTATAAGGAGCAAAGTTT
Downstream 100 bases:
>100_bases TATAAAATCAAAAAAACATGAAACAACTCTTTAAATAGAGTTGTTTTTTATTTTTATTACTTTAAAATAATTTAAAATAT ATTGATATTTTTAAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: ORF219 [H]
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MDLWKEQDENGISPNVSNERKVVVASNGEKTLYIFIIVISIISIIGWIFLLVWWFNTKNHLIQTKNSVNEASSSIQVAQT KRFDLLNKMIEQTKSYYKYEEKVLDEITKNRSIQMSNDINKNEEVLNKLQNLVNVQFERYPDLKSSNILMELMSTSSYLE NEIASSRRAYNSRATDWNIMIFQFMTVIVAEKLKLETFPIYAANKQERKDVDMKSLSDF
Sequences:
>Translated_219_residues MDL*KEQDENGISPNVSNERKVVVASNGEKTLYIFIIVISIISIIG*IFLLV**FNTKNHLIQTKNSVNEASSSIQVAQT KRFDLLNKMIEQTKSYYKYEEKVLDEITKNRSIQMSNDINKNEEVLNKLQNLVNVQFERYPDLKSSNILMELMSTSSYLE NEIASSRRAYNSRATD*NIMIFQFMTVIVAEKLKLETFPIYAANKQERKDVDMKSLSDF >Mature_219_residues MDL*KEQDENGISPNVSNERKVVVASNGEKTLYIFIIVISIISIIG*IFLLV**FNTKNHLIQTKNSVNEASSSIQVAQT KRFDLLNKMIEQTKSYYKYEEKVLDEITKNRSIQMSNDINKNEEVLNKLQNLVNVQFERYPDLKSSNILMELMSTSSYLE NEIASSRRAYNSRATD*NIMIFQFMTVIVAEKLKLETFPIYAANKQERKDVDMKSLSDF
Specific function: Unknown
COG id: COG1704
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the LemA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007156 [H]
Pfam domain/function: PF04011 LemA [H]
EC number: NA
Molecular weight: Translated: 24625; Mature: 24625
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLKEQDENGISPNVSNERKVVVASNGEKTLYIFIIVISIISIIGIFLLVFNTKNHLIQT CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC KNSVNEASSSIQVAQTKRFDLLNKMIEQTKSYYKYEEKVLDEITKNRSIQMSNDINKNEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH VLNKLQNLVNVQFERYPDLKSSNILMELMSTSSYLENEIASSRRAYNSRATDNIMIFQFM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVIVAEKLKLETFPIYAANKQERKDVDMKSLSDF HHHHHHHHHHHCCCEEECCCHHHHCCCHHHHCCC >Mature Secondary Structure MDLKEQDENGISPNVSNERKVVVASNGEKTLYIFIIVISIISIIGIFLLVFNTKNHLIQT CCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC KNSVNEASSSIQVAQTKRFDLLNKMIEQTKSYYKYEEKVLDEITKNRSIQMSNDINKNEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH VLNKLQNLVNVQFERYPDLKSSNILMELMSTSSYLENEIASSRRAYNSRATDNIMIFQFM HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH TVIVAEKLKLETFPIYAANKQERKDVDMKSLSDF HHHHHHHHHHHCCCEEECCCHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7521872 [H]