| Definition | Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome. |
|---|---|
| Accession | NC_002162 |
| Length | 751,719 |
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Identifier: 13357868
GI number: 13357868
Start: 352983
End: 354128
Strand: Reverse
Name: Not Available
Synonym: UU308
Alternate gene names: NA
Gene position: 354128-352983 (Counterclockwise)
Preceding gene: 13357870
Following gene: 13357867
Centisome position: 47.11
GC content: 17.89
Gene sequence:
>1146_bases ATGGATATAGTAATTAAGAAAAATTGTAATTTTGTTAAAAATGATGACCATTTATATTCTTTTTATACACCACTAATTGG TATGCAAGCAGTAGCTTTATATTCTTGATTCGTTAATAGAGAAAATATTTTTAATAAAAAGGGTACAATTAATTTAACTC ATGAATATTTATTAGATGAACTTAATATTTCAATTAATACATACAACGAATTAATTACTAAATTAATTAATGTTGATTTA ATTAAAATTTATTCTTTTGAAAATAATTCCCAACAAGTAATTGAAGTTTTTCGACCATTAAAATTTAGCGAATTTATAAA TATTGAAAAATTTAATGAAGAATTAAAAAATAATGTTTCATTAAATCATTATAATGTTTTAAATTTATTAAATAAAGAGA ATAATATTGATACTAATCGTTTAATTGATTTATCAGCTCAATTTAAGACAAATCATTTTAACAATCTCGAAAATAAATTA GATAAAATTAAAAAAATAATTTTAAAAGAATATGGATTATCACTTCAAATTGATGAATCAACAAAGTTGTGCTTAATAAA TTTTTTCAAAAAATATAAATTTAGTATTGATCAAATGTTAAATTTAATCAAAAATAATTTAATTAATAATATTGATTTTT TAACAATTGATTTAAATAAATTAGAATTAACAATTTTTTCAAATATGGAATTCGAAAAAAATAAAACAAAATTTCAATAT TACAATATTGAACGTGATTTTAATATTTTTAATAAAAACAGTAATTTAGATCGATTCAAAAATGTAATTAATGATTATAA TAATTTTAAACCTTCAGATTTTTTAAAACATATTCGTAAAGAAAAATTAAGTTTAAAAGATAAAGAGGCTATCAATTTAT TAACGTATGACAAATCATTAAGTGATCCAATTGTTAATGTTATCTTAGATTTTGTTTTATTTAAAAATTTAGGGCGTTTA AATGTAAAATATTTAAAACGTATTAAAGAAACAGTACTGGGAATCAATATTAAAGATGAGTATGAAATGATTAAATTTTT TCAAAATAAAAAGAATGATCATAAAGAATTAATTTGTGAAGATAGTGATAATGCTAATACTTTCAAAAATACTAATTTTA TTGAAGTAAAATTTGGAGATTTATAA
Upstream 100 bases:
>100_bases TCAAATAAATAAATTGACAATTAAATTAAATAAAAGCATCTAAAATATTGATTAATGAAAAATAGATTTGATTAAAATTC AAAGGGAATATGTAAGGTTT
Downstream 100 bases:
>100_bases AAATGAACAATAATCAAGTTGATGATGAATTAGATTTAGAGAATTTTAATTATCAAAAAGCATTAGAAATTCCGAATATT AAAGCAATTAATTTAACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MDIVIKKNCNFVKNDDHLYSFYTPLIGMQAVALYSWFVNRENIFNKKGTINLTHEYLLDELNISINTYNELITKLINVDL IKIYSFENNSQQVIEVFRPLKFSEFINIEKFNEELKNNVSLNHYNVLNLLNKENNIDTNRLIDLSAQFKTNHFNNLENKL DKIKKIILKEYGLSLQIDESTKLCLINFFKKYKFSIDQMLNLIKNNLINNIDFLTIDLNKLELTIFSNMEFEKNKTKFQY YNIERDFNIFNKNSNLDRFKNVINDYNNFKPSDFLKHIRKEKLSLKDKEAINLLTYDKSLSDPIVNVILDFVLFKNLGRL NVKYLKRIKETVLGINIKDEYEMIKFFQNKKNDHKELICEDSDNANTFKNTNFIEVKFGDL
Sequences:
>Translated_381_residues MDIVIKKNCNFVKNDDHLYSFYTPLIGMQAVALYS*FVNRENIFNKKGTINLTHEYLLDELNISINTYNELITKLINVDL IKIYSFENNSQQVIEVFRPLKFSEFINIEKFNEELKNNVSLNHYNVLNLLNKENNIDTNRLIDLSAQFKTNHFNNLENKL DKIKKIILKEYGLSLQIDESTKLCLINFFKKYKFSIDQMLNLIKNNLINNIDFLTIDLNKLELTIFSNMEFEKNKTKFQY YNIERDFNIFNKNSNLDRFKNVINDYNNFKPSDFLKHIRKEKLSLKDKEAINLLTYDKSLSDPIVNVILDFVLFKNLGRL NVKYLKRIKETVLGINIKDEYEMIKFFQNKKNDHKELICEDSDNANTFKNTNFIEVKFGDL >Mature_381_residues MDIVIKKNCNFVKNDDHLYSFYTPLIGMQAVALYS*FVNRENIFNKKGTINLTHEYLLDELNISINTYNELITKLINVDL IKIYSFENNSQQVIEVFRPLKFSEFINIEKFNEELKNNVSLNHYNVLNLLNKENNIDTNRLIDLSAQFKTNHFNNLENKL DKIKKIILKEYGLSLQIDESTKLCLINFFKKYKFSIDQMLNLIKNNLINNIDFLTIDLNKLELTIFSNMEFEKNKTKFQY YNIERDFNIFNKNSNLDRFKNVINDYNNFKPSDFLKHIRKEKLSLKDKEAINLLTYDKSLSDPIVNVILDFVLFKNLGRL NVKYLKRIKETVLGINIKDEYEMIKFFQNKKNDHKELICEDSDNANTFKNTNFIEVKFGDL
Specific function: Unknown
COG id: COG3611
COG function: function code L; Replication initiation/membrane attachment protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45162; Mature: 45162
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIVIKKNCNFVKNDDHLYSFYTPLIGMQAVALYSFVNRENIFNKKGTINLTHEYLLDEL CCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH NISINTYNELITKLINVDLIKIYSFENNSQQVIEVFRPLKFSEFINIEKFNEELKNNVSL CCEEEHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC NHYNVLNLLNKENNIDTNRLIDLSAQFKTNHFNNLENKLDKIKKIILKEYGLSLQIDEST CHHHHHHHHCCCCCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC KLCLINFFKKYKFSIDQMLNLIKNNLINNIDFLTIDLNKLELTIFSNMEFEKNKTKFQYY CHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECEEEEEEEECCEECCCCCEEEEE NIERDFNIFNKNSNLDRFKNVINDYNNFKPSDFLKHIRKEKLSLKDKEAINLLTYDKSLS EECCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCC DPIVNVILDFVLFKNLGRLNVKYLKRIKETVLGINIKDEYEMIKFFQNKKNDHKELICED HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHEEECC SDNANTFKNTNFIEVKFGDL CCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MDIVIKKNCNFVKNDDHLYSFYTPLIGMQAVALYSFVNRENIFNKKGTINLTHEYLLDEL CCEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHH NISINTYNELITKLINVDLIKIYSFENNSQQVIEVFRPLKFSEFINIEKFNEELKNNVSL CCEEEHHHHHHHHHHCCEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC NHYNVLNLLNKENNIDTNRLIDLSAQFKTNHFNNLENKLDKIKKIILKEYGLSLQIDEST CHHHHHHHHCCCCCCCCCCEEEEECHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCC KLCLINFFKKYKFSIDQMLNLIKNNLINNIDFLTIDLNKLELTIFSNMEFEKNKTKFQYY CHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEECEEEEEEEECCEECCCCCEEEEE NIERDFNIFNKNSNLDRFKNVINDYNNFKPSDFLKHIRKEKLSLKDKEAINLLTYDKSLS EECCCCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHEEEEEECCCCC DPIVNVILDFVLFKNLGRLNVKYLKRIKETVLGINIKDEYEMIKFFQNKKNDHKELICED HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHEEECC SDNANTFKNTNFIEVKFGDL CCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA