Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
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Accession | NC_001856 |
Length | 38,829 |
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The map label for this gene is 11496860
Identifier: 11496860
GI number: 11496860
Start: 28605
End: 28703
Strand: Reverse
Name: 11496860
Synonym: BBJ38
Alternate gene names: NA
Gene position: 28703-28605 (Counterclockwise)
Preceding gene: 11496861
Following gene: 11496859
Centisome position: 73.92
GC content: 33.33
Gene sequence:
>99_bases TTGGCATTGCTAGTAAATTTTAGCAAGATGCTAAAGGATGATGTGCCTGGTTATAAGGACAACCAACAATACTTTAGAGA ATGCAATTGTAAAGTATAA
Upstream 100 bases:
>100_bases TTATTCATCATAACTTGATCCGTAAATTTACGAACACCAATAATACGGTATCGTAAAATAAATAACTTTATCAGCCTCAA TAATAACTAAGAATACAAAC
Downstream 100 bases:
>100_bases GGAAGCCATAAGTAAGACTATTTGGGGCTAAGAGTCAAATTAAAATAAAGACAGAAAACAATAAGTAAGAGAAAAAGAAT GAAAGCTTAACTCATTTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 31
Protein sequence:
>32_residues MALLVNFSKMLKDDVPGYKDNQQYFRECNCKV
Sequences:
>Translated_32_residues MALLVNFSKMLKDDVPGYKDNQQYFRECNCKV >Mature_31_residues ALLVNFSKMLKDDVPGYKDNQQYFRECNCKV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3798; Mature: 3667
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 12.5 %Cys+Met (Translated Protein) 6.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 9.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALLVNFSKMLKDDVPGYKDNQQYFRECNCKV CCEEECHHHHHHHCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure ALLVNFSKMLKDDVPGYKDNQQYFRECNCKV CEEECHHHHHHHCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA