Definition | Borrelia burgdorferi B31 plasmid lp38, complete sequence. |
---|---|
Accession | NC_001856 |
Length | 38,829 |
Click here to switch to the map view.
The map label for this gene is 11496843
Identifier: 11496843
GI number: 11496843
Start: 4164
End: 4307
Strand: Reverse
Name: 11496843
Synonym: BBJ07
Alternate gene names: NA
Gene position: 4307-4164 (Counterclockwise)
Preceding gene: 11496846
Following gene: 11496841
Centisome position: 11.09
GC content: 29.17
Gene sequence:
>144_bases GTGGAGATGAATTTGCTAATAAATAGGTTTATTTTTATTTTGAATATATTTTTTGATGATATCAATAGAGGCGTTCCTCT CCTCTATAGAGATAAGGCAATAGCTTCTAGACCAAAAATAAGGTTTTCAGCAATACTTATCTAA
Upstream 100 bases:
>100_bases GATAAGCTTTGAACTACTATTTCACTTCAGAAAGAAATTAACAAGTTGTTTAACTAAAAGTAACAAAGAATTCTTCACCT ATAATTTCTATGAAATTTAG
Downstream 100 bases:
>100_bases ATAAGTATAATATTTTTTCTTATAAATAAGCCTTGAATATTCTGTTTTTAGATTGTCGATGAATTTAGAAGGCTAAATAT TGAGGGTAAATTCTAGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 47; Mature: 47
Protein sequence:
>47_residues MEMNLLINRFIFILNIFFDDINRGVPLLYRDKAIASRPKIRFSAILI
Sequences:
>Translated_47_residues MEMNLLINRFIFILNIFFDDINRGVPLLYRDKAIASRPKIRFSAILI >Mature_47_residues MEMNLLINRFIFILNIFFDDINRGVPLLYRDKAIASRPKIRFSAILI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5583; Mature: 5583
Theoretical pI: Translated: 10.84; Mature: 10.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMNLLINRFIFILNIFFDDINRGVPLLYRDKAIASRPKIRFSAILI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure MEMNLLINRFIFILNIFFDDINRGVPLLYRDKAIASRPKIRFSAILI CCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA