Definition Borrelia burgdorferi B31 plasmid lp38, complete sequence.
Accession NC_001856
Length 38,829

Click here to switch to the map view.

The map label for this gene is 11496837

Identifier: 11496837

GI number: 11496837

Start: 12445

End: 13440

Strand: Reverse

Name: 11496837

Synonym: BBJ19

Alternate gene names: NA

Gene position: 13440-12445 (Counterclockwise)

Preceding gene: 11496864

Following gene: 11496836

Centisome position: 34.61

GC content: 23.69

Gene sequence:

>996_bases
ATGGCATTAAATTTGCTTAACCATAACCACAACAAAACCAATACCAACAAACTACTTTCAAAAGATTCAAGGCTCAAAAA
AATTATTTCAGTAATTAATTACTTAAATAAAAGTTTTGAAAAAAAATATGATATTTCAATATATAGAATTCATTTTAATT
CTGAAAAACTAAAAGAGCTTTATCCTCATCATCAAATAGATATCCTTAGAGTTTTAAACTCTAATATAAGCAAAGAAGGC
TATAAACCAACTGTAATAAGAACCTTAAGAGAAGACCTAAGATTTTTAATTCACATAAAAGCAATTGAAAAAAAAATATT
AACATTCTCAAATAACTTAGGAAAATTTAAGGGAAAATTATGTATATATAAGGTGTCGCCTATTGCATATAAATTAATAT
CTGCTTATTTTGAAGCTTATAAAGCAGACCTCTATAGAAAAATAAAAAAGAGTAAAGACGGGCTTGATACACAAAATGTA
ACTAAAAATGTTACTGTATATATAAATTATCATAAAAATATATATAATAAGAATTCTATTGAAACCGTCTTTAAAAAATC
CTACACTAAGAAAAAAACAAAAAAGAAAAACAAAAAAGAATTCACAAAAAATAATTTGGAAAAAAGGTTGAAATTACCTG
AAGAAATAACTAAAGAAATTATAAGTATAGCAAAAAAAACTAAAAATCCAGATAAAACTTACAAAAATACGCTTTTTAAT
TACAAAGATTTCTTAAACTATTTATCATATGACTATAAAAAAGAAGATATTTCATATTTCTTTTTGAGCAAACTTAAAGA
ATATAAAAATAAAATTCACTTTATGAGAAAATACGCTCCTTATAAAACAGACTTTTACCTACTTGCAGGAGAATTCAAAG
ATTCGTACCATTCTAAATGGAAAACAAATAAAAAAACCAATTTTAGCGGACATGTAAAAGAAATAGCCAACAACATTCTA
AGTAAAATTTTAGAAAAGGAGCTAAAGTTTGAATGA

Upstream 100 bases:

>100_bases
ATCATCTATAAATAATAAAAAATATTAAAAAATAGAGGTTGAAATTTTTACATATTTTATACATAATAATAATTATTACA
CGAACAAATAGGAGATTAAG

Downstream 100 bases:

>100_bases
TTTACTAGAAAAACTAAAAGCGAGAAAAAAAGAAATAATAAGCAAGAAAGAAGCGGAATATAACAATAATATAAATAAAG
GAACAAAAGAAAGAACTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYDISIYRIHFNSEKLKELYPHHQIDILRVLNSNISKEG
YKPTVIRTLREDLRFLIHIKAIEKKILTFSNNLGKFKGKLCIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNV
TKNVTVYINYHKNIYNKNSIETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITKEIISIAKKTKNPDKTYKNTLFN
YKDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMRKYAPYKTDFYLLAGEFKDSYHSKWKTNKKTNFSGHVKEIANNIL
SKILEKELKFE

Sequences:

>Translated_331_residues
MALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYDISIYRIHFNSEKLKELYPHHQIDILRVLNSNISKEG
YKPTVIRTLREDLRFLIHIKAIEKKILTFSNNLGKFKGKLCIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNV
TKNVTVYINYHKNIYNKNSIETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITKEIISIAKKTKNPDKTYKNTLFN
YKDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMRKYAPYKTDFYLLAGEFKDSYHSKWKTNKKTNFSGHVKEIANNIL
SKILEKELKFE
>Mature_330_residues
ALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYDISIYRIHFNSEKLKELYPHHQIDILRVLNSNISKEGY
KPTVIRTLREDLRFLIHIKAIEKKILTFSNNLGKFKGKLCIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNVT
KNVTVYINYHKNIYNKNSIETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITKEIISIAKKTKNPDKTYKNTLFNY
KDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMRKYAPYKTDFYLLAGEFKDSYHSKWKTNKKTNFSGHVKEIANNILS
KILEKELKFE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39626; Mature: 39494

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYDISIYRIHFNSEKLKEL
CEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHH
YPHHQIDILRVLNSNISKEGYKPTVIRTLREDLRFLIHIKAIEKKILTFSNNLGKFKGKL
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCE
CIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNVTKNVTVYINYHKNIYNKNSI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHH
ETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITKEIISIAKKTKNPDKTYKNTLFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
YKDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMRKYAPYKTDFYLLAGEFKDSYHSKW
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
KTNKKTNFSGHVKEIANNILSKILEKELKFE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALNLLNHNHNKTNTNKLLSKDSRLKKIISVINYLNKSFEKKYDISIYRIHFNSEKLKEL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHH
YPHHQIDILRVLNSNISKEGYKPTVIRTLREDLRFLIHIKAIEKKILTFSNNLGKFKGKL
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCE
CIYKVSPIAYKLISAYFEAYKADLYRKIKKSKDGLDTQNVTKNVTVYINYHKNIYNKNSI
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHH
ETVFKKSYTKKKTKKKNKKEFTKNNLEKRLKLPEEITKEIISIAKKTKNPDKTYKNTLFN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH
YKDFLNYLSYDYKKEDISYFFLSKLKEYKNKIHFMRKYAPYKTDFYLLAGEFKDSYHSKW
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
KTNKKTNFSGHVKEIANNILSKILEKELKFE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA