Definition Borrelia burgdorferi B31 plasmid lp36, complete sequence.
Accession NC_001855
Length 36,849

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The map label for this gene is 11496826

Identifier: 11496826

GI number: 11496826

Start: 25813

End: 26379

Strand: Reverse

Name: 11496826

Synonym: BBK41

Alternate gene names: NA

Gene position: 26379-25813 (Counterclockwise)

Preceding gene: 11496827

Following gene: 11496824

Centisome position: 71.59

GC content: 30.69

Gene sequence:

>567_bases
TTGATAAGATTAAAGCACAATATGAGGAAGAGAGGAGAAATAGAAAAGAAAGCAAGACTTCAAAAATTCATGCAAACTAC
TTCTGACTTAACTAATCTTGTTAAGATGGCTGGGCTTGAGGCTTATAGCATTTCCCATAAATTAAAAGATCTTGAAAAAG
GTATTGAAAATTATGAAGACAACAATAATTCTACTAAAGACACACTAAACCAATCTCTTAAAGATGTTATTTATGAGATT
ACAAAGCTTAGTAGTCTTATAGAAGCAAAAGATAAGATTGATCAGCGTAAGAAATTGGGTTATCAGACAGAACAAGAGTT
TGATGCTAAATTTATAAACTTAAAGAACATCAAAGATAAGCTAAAGACTTTATGTGGTAAGGCTAAAGGCCATCTTGGTA
GCAATCTTTCTAGCGTTACTATTGATGGGATTACTAAAGAGAAGGTAGCTCAAGCTTATCTTATCATTAAACTAATACAC
AAAACATTAATTTATATGAATGATGATAGTAAAGGTAGCCTTGCTACTATACTTAATGACTTAGAAAAGGATGCCAAATC
AATATAA

Upstream 100 bases:

>100_bases
ATGCTCTTATTAAAGAAACTCTTGAAGCTATAAAGGAAAAAATTAAAGAAGAAAAGAAAAGCTATTCTAGAAGAGCAGCA
AAGACAGAAACAACAAGAGC

Downstream 100 bases:

>100_bases
CTAGCACAACAATATCTTCTTATTTTAAAAAAGCCTAAGTACTTGTATCTTAGGCTTTTTTAAAAATTATCTTGCCTCTT
AGACCATTCTTGATCATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MIRLKHNMRKRGEIEKKARLQKFMQTTSDLTNLVKMAGLEAYSISHKLKDLEKGIENYEDNNNSTKDTLNQSLKDVIYEI
TKLSSLIEAKDKIDQRKKLGYQTEQEFDAKFINLKNIKDKLKTLCGKAKGHLGSNLSSVTIDGITKEKVAQAYLIIKLIH
KTLIYMNDDSKGSLATILNDLEKDAKSI

Sequences:

>Translated_188_residues
MIRLKHNMRKRGEIEKKARLQKFMQTTSDLTNLVKMAGLEAYSISHKLKDLEKGIENYEDNNNSTKDTLNQSLKDVIYEI
TKLSSLIEAKDKIDQRKKLGYQTEQEFDAKFINLKNIKDKLKTLCGKAKGHLGSNLSSVTIDGITKEKVAQAYLIIKLIH
KTLIYMNDDSKGSLATILNDLEKDAKSI
>Mature_188_residues
MIRLKHNMRKRGEIEKKARLQKFMQTTSDLTNLVKMAGLEAYSISHKLKDLEKGIENYEDNNNSTKDTLNQSLKDVIYEI
TKLSSLIEAKDKIDQRKKLGYQTEQEFDAKFINLKNIKDKLKTLCGKAKGHLGSNLSSVTIDGITKEKVAQAYLIIKLIH
KTLIYMNDDSKGSLATILNDLEKDAKSI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21405; Mature: 21405

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLKHNMRKRGEIEKKARLQKFMQTTSDLTNLVKMAGLEAYSISHKLKDLEKGIENYED
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
NNNSTKDTLNQSLKDVIYEITKLSSLIEAKDKIDQRKKLGYQTEQEFDAKFINLKNIKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LKTLCGKAKGHLGSNLSSVTIDGITKEKVAQAYLIIKLIHKTLIYMNDDSKGSLATILND
HHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LEKDAKSI
HHHHHHCC
>Mature Secondary Structure
MIRLKHNMRKRGEIEKKARLQKFMQTTSDLTNLVKMAGLEAYSISHKLKDLEKGIENYED
CCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
NNNSTKDTLNQSLKDVIYEITKLSSLIEAKDKIDQRKKLGYQTEQEFDAKFINLKNIKDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LKTLCGKAKGHLGSNLSSVTIDGITKEKVAQAYLIIKLIHKTLIYMNDDSKGSLATILND
HHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
LEKDAKSI
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]