Definition Borrelia burgdorferi B31 plasmid lp28-3, complete sequence.
Accession NC_001853
Length 28,601

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The map label for this gene is 11496699

Identifier: 11496699

GI number: 11496699

Start: 9848

End: 10516

Strand: Reverse

Name: 11496699

Synonym: BBH13

Alternate gene names: NA

Gene position: 10516-9848 (Counterclockwise)

Preceding gene: 11496716

Following gene: 11496714

Centisome position: 36.77

GC content: 25.26

Gene sequence:

>669_bases
ATGAAAGCAGTTTTGGCAACGACAAATATTACCGAAGATCAAATATATAGAGAGTTTCTGCGACTAGGAATGGAACAGTT
AATAGCTCAAGATTTGTCAAAAAGATATTATCACAATGAGCTTACATATAGAGATTTGGAAAATTTAGAAAAACAATTCG
GTATAAGGTTCGAGAACCTTATTTCTGAGATTTCTTTTTTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCT
AAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAATTT
ACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATG
CTAAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAAT
TTACAAAAAGACATATTTAATTTGGCACAAGCTCTTAAAAAAGAAGTTCAAATTAATAGTCAATTTTTATTGGAAAAACT
CAAGGTGAGCAACAGAATAATAATTATTATTACAGTAATAATAGTTCCCATTGCTATATCTAGCATAACAAATATTGTTA
TGCTACTAATTGCTAAATTTTTTAAATAG

Upstream 100 bases:

>100_bases
GTTTGTGTGCATTATATCTGCTTTATGAGATTTTGAAGGAAATGTTCCGATATTTGGCTTTGATTTATGTTAAAATATAT
ATATAGTAGGTGAGTGAATT

Downstream 100 bases:

>100_bases
AAATTACAAAGAATTTTTTATTCATATTCACTTAAGAAAAAAATAGATATAATCAGCTAATATTTTTGTAGGTTTTTAGA
TATTTTGGGCTGTATTCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Repeat Motif-Containing Protein; Repeat Motif-Containing Gene Protein; Bdr Proitein; Repeat Motif-Containing Gene; KID Repeat Protein; BdrQ Protein; ORF15/Rep+; Repeat Motif Gene A Protein; RepH21 Gene Homologue; ORF23/BdrA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA
KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN
LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK

Sequences:

>Translated_222_residues
MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA
KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN
LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK
>Mature_222_residues
MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA
KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN
LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25840; Mature: 25840

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENL
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
ISEISFLEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLAQALKKEVQINS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENL
CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH
ISEISFLEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLAQALKKEVQINS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA