Definition | Borrelia burgdorferi B31 plasmid lp28-3, complete sequence. |
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Accession | NC_001853 |
Length | 28,601 |
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The map label for this gene is 11496699
Identifier: 11496699
GI number: 11496699
Start: 9848
End: 10516
Strand: Reverse
Name: 11496699
Synonym: BBH13
Alternate gene names: NA
Gene position: 10516-9848 (Counterclockwise)
Preceding gene: 11496716
Following gene: 11496714
Centisome position: 36.77
GC content: 25.26
Gene sequence:
>669_bases ATGAAAGCAGTTTTGGCAACGACAAATATTACCGAAGATCAAATATATAGAGAGTTTCTGCGACTAGGAATGGAACAGTT AATAGCTCAAGATTTGTCAAAAAGATATTATCACAATGAGCTTACATATAGAGATTTGGAAAATTTAGAAAAACAATTCG GTATAAGGTTCGAGAACCTTATTTCTGAGATTTCTTTTTTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCT AAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAATTT ACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATG CTAAGATAGATTCTGTAGAAAAGAATTTACAAAAAGACATATTTAATTTAGATGCTAAGATAGATTCTGTAGAAAAGAAT TTACAAAAAGACATATTTAATTTGGCACAAGCTCTTAAAAAAGAAGTTCAAATTAATAGTCAATTTTTATTGGAAAAACT CAAGGTGAGCAACAGAATAATAATTATTATTACAGTAATAATAGTTCCCATTGCTATATCTAGCATAACAAATATTGTTA TGCTACTAATTGCTAAATTTTTTAAATAG
Upstream 100 bases:
>100_bases GTTTGTGTGCATTATATCTGCTTTATGAGATTTTGAAGGAAATGTTCCGATATTTGGCTTTGATTTATGTTAAAATATAT ATATAGTAGGTGAGTGAATT
Downstream 100 bases:
>100_bases AAATTACAAAGAATTTTTTATTCATATTCACTTAAGAAAAAAATAGATATAATCAGCTAATATTTTTGTAGGTTTTTAGA TATTTTGGGCTGTATTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Repeat Motif-Containing Protein; Repeat Motif-Containing Gene Protein; Bdr Proitein; Repeat Motif-Containing Gene; KID Repeat Protein; BdrQ Protein; ORF15/Rep+; Repeat Motif Gene A Protein; RepH21 Gene Homologue; ORF23/BdrA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK
Sequences:
>Translated_222_residues MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK >Mature_222_residues MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENLISEISFLEKNLQKDIFNLDA KIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKN LQKDIFNLAQALKKEVQINSQFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25840; Mature: 25840
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH ISEISFLEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLAQALKKEVQINS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKAVLATTNITEDQIYREFLRLGMEQLIAQDLSKRYYHNELTYRDLENLEKQFGIRFENL CCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHH ISEISFLEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VEKNLQKDIFNLDAKIDSVEKNLQKDIFNLDAKIDSVEKNLQKDIFNLAQALKKEVQINS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFLLEKLKVSNRIIIIITVIIVPIAISSITNIVMLLIAKFFK HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA