Definition Borrelia burgdorferi B31 plasmid lp28-2, complete sequence.
Accession NC_001852
Length 29,766

Click here to switch to the map view.

The map label for this gene is 11496691

Identifier: 11496691

GI number: 11496691

Start: 11501

End: 12355

Strand: Reverse

Name: 11496691

Synonym: BBG13

Alternate gene names: NA

Gene position: 12355-11501 (Counterclockwise)

Preceding gene: 11496676

Following gene: 11496690

Centisome position: 41.51

GC content: 34.74

Gene sequence:

>855_bases
ATGGCGCTGATTACATTAATTGTCGTGGAGGTAAAAATGGCAATTGAAAAATTGAGAATGCCGACTGGCGCAGTGCTAGT
TACGGTCAATATTGAAAAATTCAAGTGGAATTTCAAGGGTTCAGACATTAAAAATAATAATGAACCTTCTGGAACAGATC
CTACTAATTTAGTTGTAAAAGATTTGGGCTCAAACATAACAAAGCCTACCAAATGGAAGTCAATTAGCGAATGCATTTTT
AGGGTTAAAAAGATTGATTCTAAGTCAAAACTTACATCAGATTTAGATCTAAAAGAAGGTAGTATTTTCTACTATAACAA
AGATCTTTTGACAAAAATATCTACTGCATGTGATAATGCTGATGAAATTGATGTTCTACTTTTCAAAACATATTGCTTAG
GGTATTCATATACCATCAGCTCAACAAAAGCTACAGAAACTCTAAAAACAACTTGCGGATCAATCTCGGCAATTGGAAAA
ATACCAGAGCAAACTGTTGAGTTTAGCGGGTACTCCGTTAGAGAAACCGCAACTAATAAGGAAGAAATCCTAGATACATA
TATAGAAAAATCGCATTTCATAACACAAGATATTTCAAAAAATAATGACCAATGGCAAATTGGAAAACGCAGTTTGCCTA
CAAATTACGAGTTCACGGTACTTTTTGTAGATCAAATTGCAGATCAAGATCAAAGAACCAAATTCATGGTGGGCGAAGGA
CAAATTGCAACTTACAACCCAAGCCAGGACTTGAACAATCAAAAAATCGATCTAAAGTGCCAGCTTACTCTGACAAAACC
CTTAGTATCCCTTTCATGCGACTATATTAAAGATGCAAGGTTCTTCAAGATTTAG

Upstream 100 bases:

>100_bases
TCGTTGAAGTATTTTAGCATTGACGATTCCCAGGTTGAAGACGAAAATTCTGATGCAAGAATGGTAACATTGGTTGATTC
AACATTGGGAATTAGGATAG

Downstream 100 bases:

>100_bases
GAGGCAACAATGGTAATTAATGTTAATTTGACTGGCAGGGTAATGTTACCCTATATCCCAGACTATATTAGAAACGGCAA
GGAAAAGATCAAAGAAGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIF
RVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGK
IPEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG
QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI

Sequences:

>Translated_284_residues
MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIF
RVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGK
IPEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG
QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI
>Mature_283_residues
ALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVKDLGSNITKPTKWKSISECIFR
VKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNADEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKI
PEQTVEFSGYSVRETATNKEEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEGQ
IATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32090; Mature: 31959

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVK
CCEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
DLGSNITKPTKWKSISECIFRVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNA
HHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCC
DEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKIPEQTVEFSGYSVRETATNK
CCEEHEEEEHHHCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCHHEECCCCEEECCCCCH
EEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG
HHHHHHHHHHHHHEEHHHCCCCCCEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEECCC
QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI
EEEEECCCCCCCCCEEEEEEEEEEECCHHHHCCHHHCCCEEECC
>Mature Secondary Structure 
ALITLIVVEVKMAIEKLRMPTGAVLVTVNIEKFKWNFKGSDIKNNNEPSGTDPTNLVVK
CEEHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHH
DLGSNITKPTKWKSISECIFRVKKIDSKSKLTSDLDLKEGSIFYYNKDLLTKISTACDNA
HHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEEECHHHHHHHHHHCCCC
DEIDVLLFKTYCLGYSYTISSTKATETLKTTCGSISAIGKIPEQTVEFSGYSVRETATNK
CCEEHEEEEHHHCCEEEEECCCHHHHHHHHHHCCHHHHHCCCCHHEECCCCEEECCCCCH
EEILDTYIEKSHFITQDISKNNDQWQIGKRSLPTNYEFTVLFVDQIADQDQRTKFMVGEG
HHHHHHHHHHHHHEEHHHCCCCCCEEECCCCCCCCCEEEEEEEEHHCCCCCCCEEEECCC
QIATYNPSQDLNNQKIDLKCQLTLTKPLVSLSCDYIKDARFFKI
EEEEECCCCCCCCCEEEEEEEEEEECCHHHHCCHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA