Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496686
Identifier: 11496686
GI number: 11496686
Start: 116
End: 1009
Strand: Direct
Name: 11496686
Synonym: BBG01
Alternate gene names: NA
Gene position: 116-1009 (Clockwise)
Preceding gene: NA
Following gene: 11496666
Centisome position: 0.39
GC content: 25.84
Gene sequence:
>894_bases ATGAGAAAAAGTTTGTTTTTATATACATTATTAATGGGAGGATTGATGTCTTGCAATTTAGATTCCAAATTATCTAGTAA CAAAGAACAAAAAAATAACAATAATGTAAAAGAAGTTTCGAATAGTGTTCAAGAAGATGGTCTTAATGATTTATATAGTA ATCAAGAAAAGCAAAAAAGCTTTACTAAAAATTTTGGAGAATGGAAATATGAGGATTTAATTAATCCTATAGAGCCTATA ATACCTTCAGAATCACCAAAGAATAAGGCTAATATACCAAATATTTCAATTGTGCATACTCAAAAAAAAGAGATAAAAGA GGAGGATTTAATCCCTTCTACTAATGAAGAAAAGGAAGCTGATGAAGCAATTAAATATTTAGAAGAAAATATTCTTCAAA ACTCTAAATTTTCTGAATTAATTAGAGAAGTACGTGTACTTAAAGATGAATATGCTTTAATAAACTCTGATTTTTATGAT GTAATTGAAAAGATTCACAATAAAAAAACATCATTAATGGAAAATTATAAGAACAATAGAGATAAGATAAATAAATTAAC ACTGTTGCAAAATAATTTAAAGATAAATATTGAACTTGAGCAGCTTATAAATATGATTGATATTGCAGAAAATGAAATAA GATCTGCGGCTTTCTTTTTTGACACCGCTCAGAAAAGGTTAAAAGAAAGTATTATTAAAAGATTAGAGAGTAAAAATAAT AGATCTTATTATGCATTAGAATTGTCTAGACAGGCTTTAAGTGACGCAAGAAGTGCTTTAAGCAGTTTAGAATCTTTTGC TTTTAAAAGAGCTGAACCAATGGTAAGAAAGAAAAAAATAAAAGAGCTTATTAAACATGCAAAAACTGTTTTAGAAAGTC TCAATAAAAAATAA
Upstream 100 bases:
>100_bases TATATTTTATTGTAATTATTCTTAAATGATATATAATATCAATTAAGAATAATTATTATTTATAATATATATTCCTACTT AGATAAAAGGAGATATTTTT
Downstream 100 bases:
>100_bases CAAAGAATATTCCACCTATAATTTCTATGAAATTTAGGTGGAAATAAATTTACAAAGTAAATTAAATAACAAAAATAATA ATAAACTTATTTTTTTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRKSLFLYTLLMGGLMSCNLDSKLSSNKEQKNNNNVKEVSNSVQEDGLNDLYSNQEKQKSFTKNFGEWKYEDLINPIEPI IPSESPKNKANIPNISIVHTQKKEIKEEDLIPSTNEEKEADEAIKYLEENILQNSKFSELIREVRVLKDEYALINSDFYD VIEKIHNKKTSLMENYKNNRDKINKLTLLQNNLKINIELEQLINMIDIAENEIRSAAFFFDTAQKRLKESIIKRLESKNN RSYYALELSRQALSDARSALSSLESFAFKRAEPMVRKKKIKELIKHAKTVLESLNKK
Sequences:
>Translated_297_residues MRKSLFLYTLLMGGLMSCNLDSKLSSNKEQKNNNNVKEVSNSVQEDGLNDLYSNQEKQKSFTKNFGEWKYEDLINPIEPI IPSESPKNKANIPNISIVHTQKKEIKEEDLIPSTNEEKEADEAIKYLEENILQNSKFSELIREVRVLKDEYALINSDFYD VIEKIHNKKTSLMENYKNNRDKINKLTLLQNNLKINIELEQLINMIDIAENEIRSAAFFFDTAQKRLKESIIKRLESKNN RSYYALELSRQALSDARSALSSLESFAFKRAEPMVRKKKIKELIKHAKTVLESLNKK >Mature_297_residues MRKSLFLYTLLMGGLMSCNLDSKLSSNKEQKNNNNVKEVSNSVQEDGLNDLYSNQEKQKSFTKNFGEWKYEDLINPIEPI IPSESPKNKANIPNISIVHTQKKEIKEEDLIPSTNEEKEADEAIKYLEENILQNSKFSELIREVRVLKDEYALINSDFYD VIEKIHNKKTSLMENYKNNRDKINKLTLLQNNLKINIELEQLINMIDIAENEIRSAAFFFDTAQKRLKESIIKRLESKNN RSYYALELSRQALSDARSALSSLESFAFKRAEPMVRKKKIKELIKHAKTVLESLNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34557; Mature: 34557
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLFLYTLLMGGLMSCNLDSKLSSNKEQKNNNNVKEVSNSVQEDGLNDLYSNQEKQKS CCCHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHH FTKNFGEWKYEDLINPIEPIIPSESPKNKANIPNISIVHTQKKEIKEEDLIPSTNEEKEA HHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHHH DEAIKYLEENILQNSKFSELIREVRVLKDEYALINSDFYDVIEKIHNKKTSLMENYKNNR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH DKINKLTLLQNNLKINIELEQLINMIDIAENEIRSAAFFFDTAQKRLKESIIKRLESKNN HHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RSYYALELSRQALSDARSALSSLESFAFKRAEPMVRKKKIKELIKHAKTVLESLNKK CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKSLFLYTLLMGGLMSCNLDSKLSSNKEQKNNNNVKEVSNSVQEDGLNDLYSNQEKQKS CCCHHHHHHHHHHHHHHCCCCHHHHCCHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHH FTKNFGEWKYEDLINPIEPIIPSESPKNKANIPNISIVHTQKKEIKEEDLIPSTNEEKEA HHHHCCCCCHHHHCCHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHCCCCCCCCHHHH DEAIKYLEENILQNSKFSELIREVRVLKDEYALINSDFYDVIEKIHNKKTSLMENYKNNR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCH DKINKLTLLQNNLKINIELEQLINMIDIAENEIRSAAFFFDTAQKRLKESIIKRLESKNN HHHHHHHHEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC RSYYALELSRQALSDARSALSSLESFAFKRAEPMVRKKKIKELIKHAKTVLESLNKK CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA