Definition Borrelia burgdorferi B31 plasmid lp28-2, complete sequence.
Accession NC_001852
Length 29,766

Click here to switch to the map view.

The map label for this gene is 11496684

Identifier: 11496684

GI number: 11496684

Start: 18837

End: 19619

Strand: Reverse

Name: 11496684

Synonym: BBG23

Alternate gene names: NA

Gene position: 19619-18837 (Counterclockwise)

Preceding gene: 11496685

Following gene: 11496683

Centisome position: 65.91

GC content: 36.53

Gene sequence:

>783_bases
ATGTTAAGTGATGATGATTTTGAAAACATCAAAAAAAGACTTCAAGCCGACAATATCAAAATTCAATTTGGCGTTGGAAC
TATGGAAGAAGCAAAAAATTATGTTGGCAAACTTGGCGAACCTATTGTTGTTAAAGATAAAGAATTATTTGCTATTTGCA
ATGGTAAAGATACTACTAATAGAAAATATTATCCCATTAACAAGAATACCAAGCCCCCTATTGGCGAAAATATAGATGAT
TATTTAAAAGACTTAGTTAATTGGTGTTTAGAAAACACTTATCCTGGATTTTTAACTGCAGAATTCGTCGAGCAAGGATC
TATATCAAGAAGCAAGTTGGTACAAGCTTTTGAAGATACTAAAAAATTTTGTATTCCAGATGGAAGACCTCTCCCAGACA
ATTGTTTTGTAAAAGAAAAGTTTGGAATATCTTTGGCACCTAAGTTGTCGGGCAGATTCTTGAGACACTATGATTCTGGC
GGCTCCACCGATTCTGACGGTACAAGAAGCTTAGGGCATACACAAGAAGATTCTTATAAGAGTCACGATCATGATCTTGA
CTTGAGCGTATTGGATAGTCTGCGAGGGCGACTTGTGACTGATTACTCCTCCATCAGAAGAGATTCTAATTGGAGTACAG
GCTCCACCTCTTTTGTTACTCATATAGAATACGGTGAACCAATACAGTCGTGGCGATACCCTTCCTACACAAAATACAGT
GGAGATGACGAAACACGACCCAAAAATACATGTTATATTTCATTCTACAGATATGATTGGTAG

Upstream 100 bases:

>100_bases
ACTTGCCCTTAATTTAGCAAGAAAATCAAATGCAGGGGTGCGAACACTTGATCTTAGCACTTACATGGAAAACACTAAAG
ACAAACAGGAGGTTGCTTAG

Downstream 100 bases:

>100_bases
GTAAAATCAATGATAACACAACAAGACTACACAGAAATAAAAAAGAAACTCGAAAACACTAAAACTCGAATCCAATTCAG
AAATGGAAATAAAATAGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD
YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG
GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS
GDDETRPKNTCYISFYRYDW

Sequences:

>Translated_260_residues
MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD
YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG
GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS
GDDETRPKNTCYISFYRYDW
>Mature_260_residues
MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD
YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG
GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS
GDDETRPKNTCYISFYRYDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29807; Mature: 29807

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTN
CCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCC
RKYYPINKNTKPPIGENIDDYLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDT
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
KKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYK
HHEECCCCCCCCCCCEEECCCCCEECCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS
CCCCCCCHHHHHHHHCCEEHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCC
GDDETRPKNTCYISFYRYDW
CCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTN
CCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCC
RKYYPINKNTKPPIGENIDDYLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDT
CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH
KKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYK
HHEECCCCCCCCCCCEEECCCCCEECCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
SHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS
CCCCCCCHHHHHHHHCCEEHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCC
GDDETRPKNTCYISFYRYDW
CCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA