Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496684
Identifier: 11496684
GI number: 11496684
Start: 18837
End: 19619
Strand: Reverse
Name: 11496684
Synonym: BBG23
Alternate gene names: NA
Gene position: 19619-18837 (Counterclockwise)
Preceding gene: 11496685
Following gene: 11496683
Centisome position: 65.91
GC content: 36.53
Gene sequence:
>783_bases ATGTTAAGTGATGATGATTTTGAAAACATCAAAAAAAGACTTCAAGCCGACAATATCAAAATTCAATTTGGCGTTGGAAC TATGGAAGAAGCAAAAAATTATGTTGGCAAACTTGGCGAACCTATTGTTGTTAAAGATAAAGAATTATTTGCTATTTGCA ATGGTAAAGATACTACTAATAGAAAATATTATCCCATTAACAAGAATACCAAGCCCCCTATTGGCGAAAATATAGATGAT TATTTAAAAGACTTAGTTAATTGGTGTTTAGAAAACACTTATCCTGGATTTTTAACTGCAGAATTCGTCGAGCAAGGATC TATATCAAGAAGCAAGTTGGTACAAGCTTTTGAAGATACTAAAAAATTTTGTATTCCAGATGGAAGACCTCTCCCAGACA ATTGTTTTGTAAAAGAAAAGTTTGGAATATCTTTGGCACCTAAGTTGTCGGGCAGATTCTTGAGACACTATGATTCTGGC GGCTCCACCGATTCTGACGGTACAAGAAGCTTAGGGCATACACAAGAAGATTCTTATAAGAGTCACGATCATGATCTTGA CTTGAGCGTATTGGATAGTCTGCGAGGGCGACTTGTGACTGATTACTCCTCCATCAGAAGAGATTCTAATTGGAGTACAG GCTCCACCTCTTTTGTTACTCATATAGAATACGGTGAACCAATACAGTCGTGGCGATACCCTTCCTACACAAAATACAGT GGAGATGACGAAACACGACCCAAAAATACATGTTATATTTCATTCTACAGATATGATTGGTAG
Upstream 100 bases:
>100_bases ACTTGCCCTTAATTTAGCAAGAAAATCAAATGCAGGGGTGCGAACACTTGATCTTAGCACTTACATGGAAAACACTAAAG ACAAACAGGAGGTTGCTTAG
Downstream 100 bases:
>100_bases GTAAAATCAATGATAACACAACAAGACTACACAGAAATAAAAAAGAAACTCGAAAACACTAAAACTCGAATCCAATTCAG AAATGGAAATAAAATAGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS GDDETRPKNTCYISFYRYDW
Sequences:
>Translated_260_residues MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS GDDETRPKNTCYISFYRYDW >Mature_260_residues MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTNRKYYPINKNTKPPIGENIDD YLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDTKKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSG GSTDSDGTRSLGHTQEDSYKSHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS GDDETRPKNTCYISFYRYDW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29807; Mature: 29807
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTN CCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCC RKYYPINKNTKPPIGENIDDYLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDT CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH KKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYK HHEECCCCCCCCCCCEEECCCCCEECCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS CCCCCCCHHHHHHHHCCEEHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCC GDDETRPKNTCYISFYRYDW CCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MLSDDDFENIKKRLQADNIKIQFGVGTMEEAKNYVGKLGEPIVVKDKELFAICNGKDTTN CCCCCHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHCCCCEEEECCEEEEEECCCCCCC RKYYPINKNTKPPIGENIDDYLKDLVNWCLENTYPGFLTAEFVEQGSISRSKLVQAFEDT CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHH KKFCIPDGRPLPDNCFVKEKFGISLAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYK HHEECCCCCCCCCCCEEECCCCCEECCHHHCHHHHHCCCCCCCCCCCCCCCCCCCCCCCC SHDHDLDLSVLDSLRGRLVTDYSSIRRDSNWSTGSTSFVTHIEYGEPIQSWRYPSYTKYS CCCCCCCHHHHHHHHCCEEHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCC GDDETRPKNTCYISFYRYDW CCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA