Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496683
Identifier: 11496683
GI number: 11496683
Start: 18030
End: 18827
Strand: Reverse
Name: 11496683
Synonym: BBG22
Alternate gene names: NA
Gene position: 18827-18030 (Counterclockwise)
Preceding gene: 11496684
Following gene: 11496682
Centisome position: 63.25
GC content: 34.84
Gene sequence:
>798_bases ATGATAACACAACAAGACTACACAGAAATAAAAAAGAAACTCGAAAACACTAAAACTCGAATCCAATTCAGAAATGGAAA TAAAATAGACTCGCTGGGATACCAGGGCTCTCTTGGAGAACCAATTTTGCTAAAAGATAAGCTTACTTTCTCAATATGCG ATGGGAAAAACATTGATAACAGAAAAGAGTATGAAATTACTAAAAATGCACCAAGTTTAGATTCACTTATTGAATATTTA GAACATATGATTTTGTTTTTCTTGGAAAAAACACCCGTAGGTACCTTGACTGCCAAATTTGCAATGGAAGGATCAATCCT TACAAGAAGCAAATTGATTCAAGCATTTACAAACACAAACAAATTTTGTATTCCAGACGGAAGAAGCTTGCCAAGCAATT GCTACGCATATAAAGTTTTAGGAATATCTTCAGCACCCAAGTTGTCGGGCAGATTCTTGAGACACTATGATTCTGGCGGC TCCACCGATTCTGACGGTACAAGAAGCTTAGGGCATACACAAGAAGATTCTTATAAGAATCACGATCATGATCTTGACTT CAGTAGAATTAATTTTAAAGGCAAATTAGTAAAAAGAATGACAATGATTTATCGTAGTGCTGATACTTGGTATACTTGGT ATTGGGCTGAGGAGATTATGTCTCCCTTTATTACAGGCTATAGTTATGAAGAGATAGACCCCGAATATTTATTACCACCT TTCACAAGTCAAAGTGGTTCAAAAGAAACAAAACCTAAAAACACTTGCTATATATCTTTTTACAGATACGATCTTTAG
Upstream 100 bases:
>100_bases GCGATACCCTTCCTACACAAAATACAGTGGAGATGACGAAACACGACCCAAAAATACATGTTATATTTCATTCTACAGAT ATGATTGGTAGGTAAAATCA
Downstream 100 bases:
>100_bases GAGAAAAATTATGGACAATTTACAAATTCAAGAAAATTTAAAAAAATTAATAGAAGAAAAACTTTCTTTTGATAATCAAA CTGTACACAATTCCAGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MITQQDYTEIKKKLENTKTRIQFRNGNKIDSLGYQGSLGEPILLKDKLTFSICDGKNIDNRKEYEITKNAPSLDSLIEYL EHMILFFLEKTPVGTLTAKFAMEGSILTRSKLIQAFTNTNKFCIPDGRSLPSNCYAYKVLGISSAPKLSGRFLRHYDSGG STDSDGTRSLGHTQEDSYKNHDHDLDFSRINFKGKLVKRMTMIYRSADTWYTWYWAEEIMSPFITGYSYEEIDPEYLLPP FTSQSGSKETKPKNTCYISFYRYDL
Sequences:
>Translated_265_residues MITQQDYTEIKKKLENTKTRIQFRNGNKIDSLGYQGSLGEPILLKDKLTFSICDGKNIDNRKEYEITKNAPSLDSLIEYL EHMILFFLEKTPVGTLTAKFAMEGSILTRSKLIQAFTNTNKFCIPDGRSLPSNCYAYKVLGISSAPKLSGRFLRHYDSGG STDSDGTRSLGHTQEDSYKNHDHDLDFSRINFKGKLVKRMTMIYRSADTWYTWYWAEEIMSPFITGYSYEEIDPEYLLPP FTSQSGSKETKPKNTCYISFYRYDL >Mature_265_residues MITQQDYTEIKKKLENTKTRIQFRNGNKIDSLGYQGSLGEPILLKDKLTFSICDGKNIDNRKEYEITKNAPSLDSLIEYL EHMILFFLEKTPVGTLTAKFAMEGSILTRSKLIQAFTNTNKFCIPDGRSLPSNCYAYKVLGISSAPKLSGRFLRHYDSGG STDSDGTRSLGHTQEDSYKNHDHDLDFSRINFKGKLVKRMTMIYRSADTWYTWYWAEEIMSPFITGYSYEEIDPEYLLPP FTSQSGSKETKPKNTCYISFYRYDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30545; Mature: 30545
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITQQDYTEIKKKLENTKTRIQFRNGNKIDSLGYQGSLGEPILLKDKLTFSICDGKNIDN CCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCC RKEYEITKNAPSLDSLIEYLEHMILFFLEKTPVGTLTAKFAMEGSILTRSKLIQAFTNTN CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHECCCCHHHHHHHHHHHHCCC KFCIPDGRSLPSNCYAYKVLGISSAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYKN CEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC HDHDLDFSRINFKGKLVKRMTMIYRSADTWYTWYWAEEIMSPFITGYSYEEIDPEYLLPP CCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCEECCC FTSQSGSKETKPKNTCYISFYRYDL CCCCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MITQQDYTEIKKKLENTKTRIQFRNGNKIDSLGYQGSLGEPILLKDKLTFSICDGKNIDN CCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCCCC RKEYEITKNAPSLDSLIEYLEHMILFFLEKTPVGTLTAKFAMEGSILTRSKLIQAFTNTN CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEHECCCCHHHHHHHHHHHHCCC KFCIPDGRSLPSNCYAYKVLGISSAPKLSGRFLRHYDSGGSTDSDGTRSLGHTQEDSYKN CEECCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC HDHDLDFSRINFKGKLVKRMTMIYRSADTWYTWYWAEEIMSPFITGYSYEEIDPEYLLPP CCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCEECCC FTSQSGSKETKPKNTCYISFYRYDL CCCCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA