Definition Borrelia burgdorferi B31 plasmid lp28-2, complete sequence.
Accession NC_001852
Length 29,766

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The map label for this gene is 11496668

Identifier: 11496668

GI number: 11496668

Start: 5378

End: 5950

Strand: Direct

Name: 11496668

Synonym: BBG07

Alternate gene names: NA

Gene position: 5378-5950 (Clockwise)

Preceding gene: 11496667

Following gene: 11496669

Centisome position: 18.07

GC content: 24.43

Gene sequence:

>573_bases
ATGCAAAACATGGCAAAATCCATACAATTAGTTAAACCAATAGTTAGATGTTCAAATAAAAAAGATCTTTTTATTAAGAT
TGAAAAAGATAATGATAAAACAATATATCACACAAAAATAATGATGGATATTTATAAATTTGGACTTAATAAGAAAAAAA
ATAAATATCGTATATCATTAAGAGGATTATTTAATCAATCAAAAGTTGAAGAATTTAATTTATTTACATTAAGAGCAGAT
GATAAATTTTTAGGCATTTATTACGGGTATAAAAAACGAATAAAGAAAATTTTTGTGAAGTACCAAGTTGGCGGAATTGA
AAAATCTTATTCTTTGTCAAAGACATATTACATGGAGGTTAGATTTAAAAAGGGAAGTATTTTTTGCTACTTTAAGAGCT
TACCCAGGATACTAAAAAAAGAAAATGTTAATACGACCTACAATAAAGCATTATTTAGTATGTTTACGACATTAGAAAGG
CAAGTATATGATTTTTATGATAAAAAATACCCACAAAAAGGACCTTTTATAAAATGGATAGAAAAAAGTTGGCTAAAAAA
CCACATATTATAG

Upstream 100 bases:

>100_bases
ATATAATAAAGTATTTAATAATAATTATTATTATGAATTATTAGAAATAATAAAAAAGGAAAAAAATCTTCAGTTAAAAG
AAGTTGTATAAGAATTAAAT

Downstream 100 bases:

>100_bases
CTATTGCTTCAATTAAGGGAGGAGTTGGTAAAAGCACTTCTTCGATAATGTTTTCAACAATTCTTAGCAAAACTAATAAA
GTGCTACTTGTGGACCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD
DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER
QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL

Sequences:

>Translated_190_residues
MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD
DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER
QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL
>Mature_190_residues
MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD
DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER
QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22991; Mature: 22991

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISL
CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEE
RGLFNQSKVEEFNLFTLRADDKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEV
EECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEE
RFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLERQVYDFYDKKYPQKGPFIKWI
EEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EKSWLKNHIL
HHHHHHHCCC
>Mature Secondary Structure
MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISL
CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEE
RGLFNQSKVEEFNLFTLRADDKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEV
EECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEE
RFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLERQVYDFYDKKYPQKGPFIKWI
EEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
EKSWLKNHIL
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA