Definition | Borrelia burgdorferi B31 plasmid lp28-2, complete sequence. |
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Accession | NC_001852 |
Length | 29,766 |
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The map label for this gene is 11496668
Identifier: 11496668
GI number: 11496668
Start: 5378
End: 5950
Strand: Direct
Name: 11496668
Synonym: BBG07
Alternate gene names: NA
Gene position: 5378-5950 (Clockwise)
Preceding gene: 11496667
Following gene: 11496669
Centisome position: 18.07
GC content: 24.43
Gene sequence:
>573_bases ATGCAAAACATGGCAAAATCCATACAATTAGTTAAACCAATAGTTAGATGTTCAAATAAAAAAGATCTTTTTATTAAGAT TGAAAAAGATAATGATAAAACAATATATCACACAAAAATAATGATGGATATTTATAAATTTGGACTTAATAAGAAAAAAA ATAAATATCGTATATCATTAAGAGGATTATTTAATCAATCAAAAGTTGAAGAATTTAATTTATTTACATTAAGAGCAGAT GATAAATTTTTAGGCATTTATTACGGGTATAAAAAACGAATAAAGAAAATTTTTGTGAAGTACCAAGTTGGCGGAATTGA AAAATCTTATTCTTTGTCAAAGACATATTACATGGAGGTTAGATTTAAAAAGGGAAGTATTTTTTGCTACTTTAAGAGCT TACCCAGGATACTAAAAAAAGAAAATGTTAATACGACCTACAATAAAGCATTATTTAGTATGTTTACGACATTAGAAAGG CAAGTATATGATTTTTATGATAAAAAATACCCACAAAAAGGACCTTTTATAAAATGGATAGAAAAAAGTTGGCTAAAAAA CCACATATTATAG
Upstream 100 bases:
>100_bases ATATAATAAAGTATTTAATAATAATTATTATTATGAATTATTAGAAATAATAAAAAAGGAAAAAAATCTTCAGTTAAAAG AAGTTGTATAAGAATTAAAT
Downstream 100 bases:
>100_bases CTATTGCTTCAATTAAGGGAGGAGTTGGTAAAAGCACTTCTTCGATAATGTTTTCAACAATTCTTAGCAAAACTAATAAA GTGCTACTTGTGGACCTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL
Sequences:
>Translated_190_residues MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL >Mature_190_residues MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISLRGLFNQSKVEEFNLFTLRAD DKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEVRFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLER QVYDFYDKKYPQKGPFIKWIEKSWLKNHIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22991; Mature: 22991
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISL CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEE RGLFNQSKVEEFNLFTLRADDKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEV EECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEE RFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLERQVYDFYDKKYPQKGPFIKWI EEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EKSWLKNHIL HHHHHHHCCC >Mature Secondary Structure MQNMAKSIQLVKPIVRCSNKKDLFIKIEKDNDKTIYHTKIMMDIYKFGLNKKKNKYRISL CCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCEEEEEE RGLFNQSKVEEFNLFTLRADDKFLGIYYGYKKRIKKIFVKYQVGGIEKSYSLSKTYYMEV EECCCCCCCCEEEEEEEECCCCEEEEEHHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEE RFKKGSIFCYFKSLPRILKKENVNTTYNKALFSMFTTLERQVYDFYDKKYPQKGPFIKWI EEECCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EKSWLKNHIL HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA