Definition | Borrelia burgdorferi B31 plasmid lp17, complete sequence. |
---|---|
Accession | NC_001849 |
Length | 16,823 |
Click here to switch to the map view.
The map label for this gene is 11496592
Identifier: 11496592
GI number: 11496592
Start: 7787
End: 8113
Strand: Direct
Name: 11496592
Synonym: BBD13
Alternate gene names: NA
Gene position: 7787-8113 (Clockwise)
Preceding gene: 11496593
Following gene: 11496591
Centisome position: 46.29
GC content: 25.99
Gene sequence:
>327_bases ATGTTAAGTATTAACGGTGTAAGACTTTATTCTTTAAAAGAATTCCAAAATATATTAGAAGATTCTTATAATCTTTCAAT TAGCAAAAATACTATATCTAAAAAATCAAAAATTTTAAAATGCGCAATCCATGTAGACAACCGTCCTTACCTTTTAGAAG ATTTTTGCACATATTTTCTAATGGACTTTAGAAGACCCAAACCTATTACAAATAGCATGAAAGAAACAATTCAATTAAGA ATTGAACAAGCAAAAAAAATAATGAGCCGAAAATCTACAAAACACGAAATACAAATTGCTTCAAAAAAGATGGGTCATAT TTTATAA
Upstream 100 bases:
>100_bases TAAGCTCTTGACAAACACCCTAACAAAAGTATTCAACATATAACCTAACATCCTTGAAACTAACATGCAATATATAATAA AATGAAATTATGAGGTATTT
Downstream 100 bases:
>100_bases TCTATCATATTGACATTTTAAAAACATTGCTATAGAATATAGTAAAAAGCTAATTATTTCGTTTGTGATGCAGTAAGAAT TTAGAATGCAAGCCAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLSINGVRLYSLKEFQNILEDSYNLSISKNTISKKSKILKCAIHVDNRPYLLEDFCTYFLMDFRRPKPITNSMKETIQLR IEQAKKIMSRKSTKHEIQIASKKMGHIL
Sequences:
>Translated_108_residues MLSINGVRLYSLKEFQNILEDSYNLSISKNTISKKSKILKCAIHVDNRPYLLEDFCTYFLMDFRRPKPITNSMKETIQLR IEQAKKIMSRKSTKHEIQIASKKMGHIL >Mature_108_residues MLSINGVRLYSLKEFQNILEDSYNLSISKNTISKKSKILKCAIHVDNRPYLLEDFCTYFLMDFRRPKPITNSMKETIQLR IEQAKKIMSRKSTKHEIQIASKKMGHIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12693; Mature: 12693
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSINGVRLYSLKEFQNILEDSYNLSISKNTISKKSKILKCAIHVDNRPYLLEDFCTYFL CCCCCCEEEEEHHHHHHHHHCCCCCEECHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH MDFRRPKPITNSMKETIQLRIEQAKKIMSRKSTKHEIQIASKKMGHIL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MLSINGVRLYSLKEFQNILEDSYNLSISKNTISKKSKILKCAIHVDNRPYLLEDFCTYFL CCCCCCEEEEEHHHHHHHHHCCCCCEECHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHH MDFRRPKPITNSMKETIQLRIEQAKKIMSRKSTKHEIQIASKKMGHIL HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA