Definition | Borrelia burgdorferi B31 plasmid lp17, complete sequence. |
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Accession | NC_001849 |
Length | 16,823 |
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The map label for this gene is 11496590
Identifier: 11496590
GI number: 11496590
Start: 9593
End: 10015
Strand: Reverse
Name: 11496590
Synonym: BBD15
Alternate gene names: NA
Gene position: 10015-9593 (Counterclockwise)
Preceding gene: 11496603
Following gene: 11496604
Centisome position: 59.53
GC content: 21.75
Gene sequence:
>423_bases TTGAAAAACAAATTATCTGTATATACTACAATAATGCTTAACTTTAAATTTTTAAAATGTGTTTACTTGTGCTTTATGGT TTTTGTAAGGTTAATTTTAATAATCAAATTTAGGGGAAAGAAATTTATGAATAGAAAATTTGTTATTTCATTATTATTTA TAATATTAACTTTTTTATTAATATTGGGTTGTGATTTATCAATAAATAACGATCGAAACAAGATAGATGGGGCTTCTCAT TTTAAAAAGAAATATATGGATAATTTGAATTATCAATGTTTAAGCAAAAAAGAGTCTGAGGCTAAAAATTCTCAAATTAA ACTGGATGAGAATAATAATAAAAATCATTTTTATTCTTCCAGAGTATCTAATGTTTCAAATTACTATGATAGAACTCATA TATCTTGCAAAAAAAATGATTGA
Upstream 100 bases:
>100_bases ATTTTGTTCGAATTCTGCTTTAAAAAATGGTTAATTTAGAATATAATTCTAATGGCTAAAATGCTAAAAATGGATATAAA TTTGGACTAATTTTATTATA
Downstream 100 bases:
>100_bases TTTTTTTTGAAAAATAAAAGCATGCTTTGTTTACAATCTGATTTTAAAAAATTTTAGTTTAGTTGGTAAATATGAGTTTT TCAGTGTCTTTTTAATAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
>140_residues MKNKLSVYTTIMLNFKFLKCVYLCFMVFVRLILIIKFRGKKFMNRKFVISLLFIILTFLLILGCDLSINNDRNKIDGASH FKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSSRVSNVSNYYDRTHISCKKND
Sequences:
>Translated_140_residues MKNKLSVYTTIMLNFKFLKCVYLCFMVFVRLILIIKFRGKKFMNRKFVISLLFIILTFLLILGCDLSINNDRNKIDGASH FKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSSRVSNVSNYYDRTHISCKKND >Mature_140_residues MKNKLSVYTTIMLNFKFLKCVYLCFMVFVRLILIIKFRGKKFMNRKFVISLLFIILTFLLILGCDLSINNDRNKIDGASH FKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSSRVSNVSNYYDRTHISCKKND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.burgdorferi BBF20 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16635; Mature: 16635
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLSVYTTIMLNFKFLKCVYLCFMVFVRLILIIKFRGKKFMNRKFVISLLFIILTFLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILGCDLSINNDRNKIDGASHFKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSS HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCEEEECCCCCCCCHHHH RVSNVSNYYDRTHISCKKND HHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MKNKLSVYTTIMLNFKFLKCVYLCFMVFVRLILIIKFRGKKFMNRKFVISLLFIILTFLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ILGCDLSINNDRNKIDGASHFKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSS HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHCCCHHHCCCCEEEECCCCCCCCHHHH RVSNVSNYYDRTHISCKKND HHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8932323; 9403685 [H]