Definition | Borrelia burgdorferi B31 plasmid lp17, complete sequence. |
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Accession | NC_001849 |
Length | 16,823 |
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The map label for this gene is 11496585
Identifier: 11496585
GI number: 11496585
Start: 1412
End: 1768
Strand: Direct
Name: 11496585
Synonym: BBD04
Alternate gene names: NA
Gene position: 1412-1768 (Clockwise)
Preceding gene: 11496598
Following gene: 11496584
Centisome position: 8.39
GC content: 22.41
Gene sequence:
>357_bases TTGGAAAAATTTTTAAAAGAAATATTAAGTATGAATAGCAAAAATAGGCTATCTTCACACTTAATAATTCTTATTTACAC ACTAAACAACATTGACCTAAATTCAAAAAATATTGGATACTATAGTAGGGGCTTTATACGCCGTGCGTTTACTTTTAACA TAGATAGATATTGCAATACTAGTAAAGATATTGAAATAGACATAGACTTATTAATAAAGTATCTCGATTTTTTAGAAAAC AACCTAAAAATTATAACTAATAAATATAAAGTAGAAAAAAATATATTCAAACTTTACTACATAATCAATTATCCTTTAAA AATATGTTACACAAAAATTATGAACTACTATAAATAG
Upstream 100 bases:
>100_bases ATCGTAAAAAATATTTCTTTGCAAATTAAGCAATTTAGAAATATAAATGTAAAGACATATATTTTTATTTGATAAATAAT AAAAATTACTGGGGCACTAT
Downstream 100 bases:
>100_bases ACTATATAATGATATTAAAAAGAGAAACATCTTTAGTATATTACTAAAGGTGTTTCTCCCCTTAATCTAAAGTTGTTTTA AGGTGTATAATGGGGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MEKFLKEILSMNSKNRLSSHLIILIYTLNNIDLNSKNIGYYSRGFIRRAFTFNIDRYCNTSKDIEIDIDLLIKYLDFLEN NLKIITNKYKVEKNIFKLYYIINYPLKICYTKIMNYYK
Sequences:
>Translated_118_residues MEKFLKEILSMNSKNRLSSHLIILIYTLNNIDLNSKNIGYYSRGFIRRAFTFNIDRYCNTSKDIEIDIDLLIKYLDFLEN NLKIITNKYKVEKNIFKLYYIINYPLKICYTKIMNYYK >Mature_118_residues MEKFLKEILSMNSKNRLSSHLIILIYTLNNIDLNSKNIGYYSRGFIRRAFTFNIDRYCNTSKDIEIDIDLLIKYLDFLEN NLKIITNKYKVEKNIFKLYYIINYPLKICYTKIMNYYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14336; Mature: 14336
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKFLKEILSMNSKNRLSSHLIILIYTLNNIDLNSKNIGYYSRGFIRRAFTFNIDRYCNT CHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEECHHHHCCC SKDIEIDIDLLIKYLDFLENNLKIITNKYKVEKNIFKLYYIINYPLKICYTKIMNYYK CCCEEEHHHHHHHHHHHHCCCEEEEECHHHHHHHHEEEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure MEKFLKEILSMNSKNRLSSHLIILIYTLNNIDLNSKNIGYYSRGFIRRAFTFNIDRYCNT CHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEECHHHHCCC SKDIEIDIDLLIKYLDFLENNLKIITNKYKVEKNIFKLYYIINYPLKICYTKIMNYYK CCCEEEHHHHHHHHHHHHCCCEEEEECHHHHHHHHEEEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA