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The map label for this gene is omp85 [H]

Identifier: 15595140

GI number: 15595140

Start: 836061

End: 838526

Strand: Direct

Name: omp85 [H]

Synonym: BB0795

Alternate gene names: 15595140

Gene position: 836061-838526 (Clockwise)

Preceding gene: 15595139

Following gene: 15595141

Centisome position: 91.8

GC content: 29.4

Gene sequence:

>2466_bases
ATGGGTTCAATTAGAGGTTTGTTTTTTGTAAGTTTTTTAATATTTTTTGTTGTTTTTAGTTTTGGTCAAGTTGAAAATTA
CAAGGGGAAAATAATAAAGGGTATTAATTTTGAAGGACTTAAGAATAAGAAGGAGAGAGATTTTATTAATATTTTAAAAC
CTTACATTGGCGTGTCATATTCTAATGAAATTTTTGATAAATTGCAAATTGATCTTTATTCTCTTGATTATTTTTCTGGG
CTTATTAAGCCTATATTTAAAATAGATGGTGAGGATCTTTTTATTACATTTATTGTAAAAGAAAAATCTTTAGTTAATTC
TGTTGTTTTTTCTGATAGCAGTAGAGTTTTTTGGAATAGCGAACTTGTTGAGAAGGTGAATATTAAAACCAATGAGCCTT
TAAATCTTGCAAGTGTTAATAAAGGTATTGGCAAGCTTGAAGAGATGTATAAAGACATGGGATATCTTGAGGTTTCTGCA
AATTTTGAAATCAAAGAAGAAGGAAATTTAGTTGATATTATTTTTAATATAGTAGCTGGACCCAAATATGTTGTTAAGGG
GATTGACTTTGAAGGAAATTTAAGCTTTAAAAGCAGTACCTTGAGGAAATCTTTAGCATCAAGAGTAGTGTCTCTTTTCT
CAGATGGTAAATATTTAAAAAGTAATGTTGATAAAGACAAGCGTCAATTAGAGTCTTTTTATAAAAATAATGGATATATT
GATGTTAAGATTATCAATAGCACTGTTGATATTAAAGATTCCCTTAAAGATTCTAAAAGACTAGAAAAGGAAGTTTTTTT
GAAATATTTTCTTTCAGAAGGCAATGTTTTTAGATTTGGAAAGCTTGAAATTTCTGGTAATTCAGTTTTTAGTTTGGAAG
AATTAAAAAGTTTTATTACCTTTAGCGAAGGTGATATTTTTAATGATTCTAAATTTGAGCAGGATTTTGTCAAAATTAAG
GAAAGTTATTTTAGAGAAGGGTATATTTTTACAGAAATTATTCCTTCGCAAAAGATAAGAGGGGAATTTGTTGATTTGTT
AATTAAAATTTTAGAAAAGGATAAAGCTCATATTGAGTCTATTACTGTTTCTAAAAATAAAAATACAGCTTCGCATGTAA
TACTTAGAGAGATTCCTCTTCAAGAGGGAGATGTTTTTAGTTTGGACAAGTTTAAGATGGGTATGGCAAATTTACAGCAG
CTTGGTTATTTTTCAAATGTAATTCCTGATATTGTTCCAGGCAATACAGAAGGGCTTATGAAAATAAATTTAAACATTGA
GGAGCGAGCAACAAGTAATTTTGGATTTGGTATGAATTTTGGAGGCAATTCAAATTCTTCATTTCCATTCTCAGTATTTG
GGCAGTGGGAGCTTTCTAATTTTTTAGGCGAAGGCTATTATTTTGCAGCAAGACTAAATTTATCTTTTTTAGAGCAAAGT
CTTAGTTTGACATTTAGAGATAATTGGTTTTTTCAAAAAAGATGGACCGTAGGTGGATTTATAGATTTTTCACATTCCGT
TAATACTGCTTATCAGGATATTAATGGGCCTATTTTTTCTGGCAAGAGGGAAGTTCCTGATCCATTTACAAGTTGGGAAG
AATATCGAGATGCTAAAAGCTTTTCCGATTTTAATGCTATGAATTATTCTTTGCTTAAACTTAGTTTTGGAGCGTTTACC
GGGTATACTTTTTCTAATTATCTTGGCAAACAAACCCTTCTTGGCACTTTGCAAACTGCTTTAAAATATGTTTTTTATGA
TAATGAGGTTAACAGACCTTCAAATTATTATTTAAGAGACAATTATAAAACTTTTAGATTTGAAAATTCTCTTAGTTTGA
GCGCGGCTTGGGATACAAGAAATTCTACCTCTTTATCTAATAATGGATTTTTACTTAAGCAACAGTTTGATTTTTTTGGT
GGATTTTTATTTGGTCAGAGCCATTTTATTAAATCTTCTACAACTTTTGAGAGATATTTTTCTCTTTTGGGATATGAGGA
TGTGTTTACTCCTTATTTTGATATTATTTTGACCTTAAGGAGTGTCTATTCAAATATATTACCTCCTCTTGGTAATGGTT
TTGAAATTGAAATTCAACCCCATCACCACATAATTCTTAGTGAAAATTTTATGCAGGCTAGAGGTTGGGGGATTTTGAAA
AATATTTACAGTTCTTTTGTAAATACTGTGCAGATATCTATTCCTTTGTTAAAAAATATTTTAGTTTGGGATGCTTTTTT
TATAGATTTTGCTTCCTATTCTTTAGAAGGGCAAGAAAATTCTTTGTTTAGACCTTTTAGTAGTTTTGCTTTTAGCTGGG
GAACTGGAATTAGAAGTCTTTTACCTCAATTGCCGCTGTCTTTTGTAATAGCTTATCCTTTTTATTTTGACAATGATAAA
GTTAACAGCTATTACAAATATTATTCTGGATTTAAATTTTTCTTAGGAATTGAGATGAGATATTGA

Upstream 100 bases:

>100_bases
ATGAGTTTGATTACAATTTTATGAAAAAAGGTTTAGATGGAATAGGAAATAATATAGGCATTTCTTGGAAATTTAAATAT
TAAATTGTTAAGAGGTTAAG

Downstream 100 bases:

>100_bases
TTAATGCTATGGAGAAATTTGTGTTTTTTTTGATTTTACCATTGTTTTTTTTATTATCTTTTAATGTTTTTTCGATAGAT
GTTATTAAGATAGGAATTGT

Product: outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 821; Mature: 820

Protein sequence:

>821_residues
MGSIRGLFFVSFLIFFVVFSFGQVENYKGKIIKGINFEGLKNKKERDFINILKPYIGVSYSNEIFDKLQIDLYSLDYFSG
LIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPLNLASVNKGIGKLEEMYKDMGYLEVSA
NFEIKEEGNLVDIIFNIVAGPKYVVKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNVDKDKRQLESFYKNNGYI
DVKIINSTVDIKDSLKDSKRLEKEVFLKYFLSEGNVFRFGKLEISGNSVFSLEELKSFITFSEGDIFNDSKFEQDFVKIK
ESYFREGYIFTEIIPSQKIRGEFVDLLIKILEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKMGMANLQQ
LGYFSNVIPDIVPGNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSVFGQWELSNFLGEGYYFAARLNLSFLEQS
LSLTFRDNWFFQKRWTVGGFIDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGAFT
GYTFSNYLGKQTLLGTLQTALKYVFYDNEVNRPSNYYLRDNYKTFRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFG
GFLFGQSHFIKSSTTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIILSENFMQARGWGILK
NIYSSFVNTVQISIPLLKNILVWDAFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDK
VNSYYKYYSGFKFFLGIEMRY

Sequences:

>Translated_821_residues
MGSIRGLFFVSFLIFFVVFSFGQVENYKGKIIKGINFEGLKNKKERDFINILKPYIGVSYSNEIFDKLQIDLYSLDYFSG
LIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPLNLASVNKGIGKLEEMYKDMGYLEVSA
NFEIKEEGNLVDIIFNIVAGPKYVVKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNVDKDKRQLESFYKNNGYI
DVKIINSTVDIKDSLKDSKRLEKEVFLKYFLSEGNVFRFGKLEISGNSVFSLEELKSFITFSEGDIFNDSKFEQDFVKIK
ESYFREGYIFTEIIPSQKIRGEFVDLLIKILEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKMGMANLQQ
LGYFSNVIPDIVPGNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSVFGQWELSNFLGEGYYFAARLNLSFLEQS
LSLTFRDNWFFQKRWTVGGFIDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGAFT
GYTFSNYLGKQTLLGTLQTALKYVFYDNEVNRPSNYYLRDNYKTFRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFG
GFLFGQSHFIKSSTTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIILSENFMQARGWGILK
NIYSSFVNTVQISIPLLKNILVWDAFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDK
VNSYYKYYSGFKFFLGIEMRY
>Mature_820_residues
GSIRGLFFVSFLIFFVVFSFGQVENYKGKIIKGINFEGLKNKKERDFINILKPYIGVSYSNEIFDKLQIDLYSLDYFSGL
IKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNSELVEKVNIKTNEPLNLASVNKGIGKLEEMYKDMGYLEVSAN
FEIKEEGNLVDIIFNIVAGPKYVVKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNVDKDKRQLESFYKNNGYID
VKIINSTVDIKDSLKDSKRLEKEVFLKYFLSEGNVFRFGKLEISGNSVFSLEELKSFITFSEGDIFNDSKFEQDFVKIKE
SYFREGYIFTEIIPSQKIRGEFVDLLIKILEKDKAHIESITVSKNKNTASHVILREIPLQEGDVFSLDKFKMGMANLQQL
GYFSNVIPDIVPGNTEGLMKINLNIEERATSNFGFGMNFGGNSNSSFPFSVFGQWELSNFLGEGYYFAARLNLSFLEQSL
SLTFRDNWFFQKRWTVGGFIDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKSFSDFNAMNYSLLKLSFGAFTG
YTFSNYLGKQTLLGTLQTALKYVFYDNEVNRPSNYYLRDNYKTFRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGG
FLFGQSHFIKSSTTFERYFSLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIILSENFMQARGWGILKN
IYSSFVNTVQISIPLLKNILVWDAFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSLLPQLPLSFVIAYPFYFDNDKV
NSYYKYYSGFKFFLGIEMRY

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=469, Percent_Identity=24.5202558635394, Blast_Score=109, Evalue=8e-25,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 94569; Mature: 94437

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIRGLFFVSFLIFFVVFSFGQVENYKGKIIKGINFEGLKNKKERDFINILKPYIGVSY
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
SNEIFDKLQIDLYSLDYFSGLIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNS
CHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECH
ELVEKVNIKTNEPLNLASVNKGIGKLEEMYKDMGYLEVSANFEIKEEGNLVDIIFNIVAG
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEHHHHHCC
PKYVVKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNVDKDKRQLESFYKNNGYI
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEE
DVKIINSTVDIKDSLKDSKRLEKEVFLKYFLSEGNVFRFGKLEISGNSVFSLEELKSFIT
EEEEECCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEHHHHHHHHE
FSEGDIFNDSKFEQDFVKIKESYFREGYIFTEIIPSQKIRGEFVDLLIKILEKDKAHIES
ECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHEE
ITVSKNKNTASHVILREIPLQEGDVFSLDKFKMGMANLQQLGYFSNVIPDIVPGNTEGLM
EEEECCCCHHHHEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
KINLNIEERATSNFGFGMNFGGNSNSSFPFSVFGQWELSNFLGEGYYFAARLNLSFLEQS
EEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEECEEHHHHCCCCEEEEEECCHHHHHHH
LSLTFRDNWFFQKRWTVGGFIDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKS
HCEEEECCEEEEEECCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCC
FSDFNAMNYSLLKLSFGAFTGYTFSNYLGKQTLLGTLQTALKYVFYDNEVNRPSNYYLRD
CCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
NYKTFRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGGFLFGQSHFIKSSTTFERYF
CCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEECCCCHHHHHH
SLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIILSENFMQARGWGILK
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCHHHHCCCHHHH
NIYSSFVNTVQISIPLLKNILVWDAFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSL
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPQLPLSFVIAYPFYFDNDKVNSYYKYYSGFKFFLGIEMRY
HHHCCHHEEEEECEEECCCCCHHHHHHHCCEEEEEEEEECC
>Mature Secondary Structure 
GSIRGLFFVSFLIFFVVFSFGQVENYKGKIIKGINFEGLKNKKERDFINILKPYIGVSY
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCC
SNEIFDKLQIDLYSLDYFSGLIKPIFKIDGEDLFITFIVKEKSLVNSVVFSDSSRVFWNS
CHHHHHHHHEEEEEHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHCCCCCCEEECH
ELVEKVNIKTNEPLNLASVNKGIGKLEEMYKDMGYLEVSANFEIKEEGNLVDIIFNIVAG
HHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCEEEEHHHHHCC
PKYVVKGIDFEGNLSFKSSTLRKSLASRVVSLFSDGKYLKSNVDKDKRQLESFYKNNGYI
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCEE
DVKIINSTVDIKDSLKDSKRLEKEVFLKYFLSEGNVFRFGKLEISGNSVFSLEELKSFIT
EEEEECCEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCEEEHHHHHHHHE
FSEGDIFNDSKFEQDFVKIKESYFREGYIFTEIIPSQKIRGEFVDLLIKILEKDKAHIES
ECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHCHHHHEE
ITVSKNKNTASHVILREIPLQEGDVFSLDKFKMGMANLQQLGYFSNVIPDIVPGNTEGLM
EEEECCCCHHHHEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE
KINLNIEERATSNFGFGMNFGGNSNSSFPFSVFGQWELSNFLGEGYYFAARLNLSFLEQS
EEEEEEHHHCCCCCCCCCCCCCCCCCCCCEEEEECEEHHHHCCCCEEEEEECCHHHHHHH
LSLTFRDNWFFQKRWTVGGFIDFSHSVNTAYQDINGPIFSGKREVPDPFTSWEEYRDAKS
HCEEEECCEEEEEECCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCC
FSDFNAMNYSLLKLSFGAFTGYTFSNYLGKQTLLGTLQTALKYVFYDNEVNRPSNYYLRD
CCCCCCCCEEEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHEECCCCCCCCCEEEEC
NYKTFRFENSLSLSAAWDTRNSTSLSNNGFLLKQQFDFFGGFLFGQSHFIKSSTTFERYF
CCEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEECCCCHHHHHH
SLLGYEDVFTPYFDIILTLRSVYSNILPPLGNGFEIEIQPHHHIILSENFMQARGWGILK
HHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCHHHHCCCHHHH
NIYSSFVNTVQISIPLLKNILVWDAFFIDFASYSLEGQENSLFRPFSSFAFSWGTGIRSL
HHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
LPQLPLSFVIAYPFYFDNDKVNSYYKYYSGFKFFLGIEMRY
HHHCCHHEEEEECEEECCCCCHHHHHHHCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]