Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
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Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is rpmF [H]
Identifier: 15595048
GI number: 15595048
Start: 740240
End: 740422
Strand: Direct
Name: rpmF [H]
Synonym: BB0703
Alternate gene names: 15595048
Gene position: 740240-740422 (Clockwise)
Preceding gene: 15595047
Following gene: 15595049
Centisome position: 81.28
GC content: 31.15
Gene sequence:
>183_bases ATGGCTGTTCCAAAATTTAAGCCTTCAAAATCTAGAAGTAGAACAAGGCGGAGTATAAATATGAGAAAAAAAATTCCACA ATTTCAAGAATGTTCTAATTGTGGTAATCTTGGCGTGAGACATAGGATTTGTTTAAAATGTGGATATTATAGGAATAACC AATATCTAGAAATAGGTTTGTAG
Upstream 100 bases:
>100_bases GTTTAATAGATTAAAATCTAAGTTTATTGACAAATGACTTGGTTAATATATATATTATTAAGATAATTTAATGTAGTTTA AAAGTAGTTAGGAGAAAGTA
Downstream 100 bases:
>100_bases CTTGTAGTAAGGAAGGTGTATTCATGGATAATGATGAAATTTTTAGCAAGGTTAGGTCTATTATATCTGAGCAACTTGAT AAAAAAGAAGATGAAATTAC
Product: 50S ribosomal protein L32
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MAVPKFKPSKSRSRTRRSINMRKKIPQFQECSNCGNLGVRHRICLKCGYYRNNQYLEIGL
Sequences:
>Translated_60_residues MAVPKFKPSKSRSRTRRSINMRKKIPQFQECSNCGNLGVRHRICLKCGYYRNNQYLEIGL >Mature_59_residues AVPKFKPSKSRSRTRRSINMRKKIPQFQECSNCGNLGVRHRICLKCGYYRNNQYLEIGL
Specific function: Unknown
COG id: COG0333
COG function: function code J; Ribosomal protein L32
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L32P family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002677 - InterPro: IPR011332 [H]
Pfam domain/function: PF01783 Ribosomal_L32p [H]
EC number: NA
Molecular weight: Translated: 7076; Mature: 6945
Theoretical pI: Translated: 11.10; Mature: 11.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 6.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVPKFKPSKSRSRTRRSINMRKKIPQFQECSNCGNLGVRHRICLKCGYYRNNQYLEIGL CCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECC >Mature Secondary Structure AVPKFKPSKSRSRTRRSINMRKKIPQFQECSNCGNLGVRHRICLKCGYYRNNQYLEIGL CCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCEEEEEECCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA