Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is mcp3 [H]
Identifier: 15594923
GI number: 15594923
Start: 591188
End: 592357
Strand: Direct
Name: mcp3 [H]
Synonym: BB0578
Alternate gene names: 15594923
Gene position: 591188-592357 (Clockwise)
Preceding gene: 15594922
Following gene: 15594924
Centisome position: 64.91
GC content: 30.77
Gene sequence:
>1170_bases ATGAAAAAATTTTCGTTTTTTAAAAAAAAGAAAAAAGCTGTTGATTTAAATCTTTTAAATGTTGTTGGTAATGACAAAAA AGATTTGAGTACTTACGAATATAAGGCTCCTGTTAAGGAAATGCTAAAGGGATTTTATCATACCAAAGCTTCCATTTCTA CTTTAAAAGTAGGATTTGAGTCATTACAAAGGATTTTGTTTTCTGAAATAGAAGATTTTGATCAGATATTTTCTACTTTT GTTGAGATGACAAATAATGCTCGTAATCAGATAAGCGTTATTTTTAGTGATCTTGGTAAAAATAATAAGGAAAAATTAAA TCAAATATCTTCTGTTATTGTTGGAATTCAAGGCAGCTTAGAAACAATAAGTAATTTTTTAGGTGCTACCAATATGATTT CTCTTAATGCAAAGCTTGAGGCTGCAAGAGCTAAAGAATATGGTAAAGGATTTTCTGTTGTTGCAGATGAGATCAAGCGA CTTTCTGATCAGGCAAAAGGTGTTATGAATATGATTTCTGTAAAGGAAATTGAGGAGGTTTCTAAAGATTTGATTTCTCA TAACCTTAAGGATTTGCAGATTGATATTGATAAGTTCTTTGCCGAGATTCTTGAACAGCTTAATTATCTTGAGAGCATAT TTAAGCGCTTTTCAAGAAGTCAAGAGGAATTTTCTTCTTTGATTGAAAGTCTTGAGAGTATAGATGCTAATATGGCTTAT TATTCAAGAAACTGTGATTCTTTGATTGGCTCTGATACTTTTATGCTGTCTAATGATGAATTTTTAAAAGAGCTAGAATT TATTATCTCAGACCAATTTTCTTGGATTAATAATTTGAGACTACTTGTTGAGGGGCAAAGGACAATATTCATTCAGACAG ATGCTTCCAAGCATGGGTTTGGATTGTTTTATAAAGGATTGTCTCCCAAGAATGATGCTATCAGGCAGTTGTGGGAAGAA GTATACATTCCTTATTTAAATATTAATAAGTTTGCAGCTGAAATTTTGATTATATTTAGGGTAGAGAATCGTAGTGATAG CGGTTTAAGGCAAGCCAAAGATTTTTTGTCTCAAGCTGAGAGTTTATCTGAAGAAATTGTTAGAAAACTTGAGCACATTA AAAAGATGGTAATTGAATTGGATAATCAAGGAATTAGTATTTTTTCTTGA
Upstream 100 bases:
>100_bases TTATTGATGTATTTGATTTGATATTAAAAGTTGAAATAATGTGTCAAATTAAGTACTGGTGACCCTATTCAAAAAAAAGT TTTTATGATAGAATCCCTTT
Downstream 100 bases:
>100_bases TTATTTTGATAAGATTTGTTGCAATAATTTAAATTAGAGATTTAAAAATTATTATGACTTTTTTAATTTTTATTTATTTG ATTAAGGTTTGTTAAAAATC
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKASISTLKVGFESLQRILFSEIEDFDQIFSTF VEMTNNARNQISVIFSDLGKNNKEKLNQISSVIVGIQGSLETISNFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKR LSDQAKGVMNMISVKEIEEVSKDLISHNLKDLQIDIDKFFAEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAY YSRNCDSLIGSDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGFGLFYKGLSPKNDAIRQLWEE VYIPYLNINKFAAEILIIFRVENRSDSGLRQAKDFLSQAESLSEEIVRKLEHIKKMVIELDNQGISIFS
Sequences:
>Translated_389_residues MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKASISTLKVGFESLQRILFSEIEDFDQIFSTF VEMTNNARNQISVIFSDLGKNNKEKLNQISSVIVGIQGSLETISNFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKR LSDQAKGVMNMISVKEIEEVSKDLISHNLKDLQIDIDKFFAEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAY YSRNCDSLIGSDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGFGLFYKGLSPKNDAIRQLWEE VYIPYLNINKFAAEILIIFRVENRSDSGLRQAKDFLSQAESLSEEIVRKLEHIKKMVIELDNQGISIFS >Mature_389_residues MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKASISTLKVGFESLQRILFSEIEDFDQIFSTF VEMTNNARNQISVIFSDLGKNNKEKLNQISSVIVGIQGSLETISNFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKR LSDQAKGVMNMISVKEIEEVSKDLISHNLKDLQIDIDKFFAEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAY YSRNCDSLIGSDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGFGLFYKGLSPKNDAIRQLWEE VYIPYLNINKFAAEILIIFRVENRSDSGLRQAKDFLSQAESLSEEIVRKLEHIKKMVIELDNQGISIFS
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 44576; Mature: 44576
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKASISTLKVGFE CCCCHHHHHHHHHHCHHHHHHHCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLQRILFSEIEDFDQIFSTFVEMTNNARNQISVIFSDLGKNNKEKLNQISSVIVGIQGSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH ETISNFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKRLSDQAKGVMNMISVKEIEEV HHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKDLISHNLKDLQIDIDKFFAEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAY HHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH YSRNCDSLIGSDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGF HHCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCC GLFYKGLSPKNDAIRQLWEEVYIPYLNINKFAAEILIIFRVENRSDSGLRQAKDFLSQAE EEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHH SLSEEIVRKLEHIKKMVIELDNQGISIFS HHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKKFSFFKKKKKAVDLNLLNVVGNDKKDLSTYEYKAPVKEMLKGFYHTKASISTLKVGFE CCCCHHHHHHHHHHCHHHHHHHCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH SLQRILFSEIEDFDQIFSTFVEMTNNARNQISVIFSDLGKNNKEKLNQISSVIVGIQGSL HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH ETISNFLGATNMISLNAKLEAARAKEYGKGFSVVADEIKRLSDQAKGVMNMISVKEIEEV HHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKDLISHNLKDLQIDIDKFFAEILEQLNYLESIFKRFSRSQEEFSSLIESLESIDANMAY HHHHHHCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHH YSRNCDSLIGSDTFMLSNDEFLKELEFIISDQFSWINNLRLLVEGQRTIFIQTDASKHGF HHCCHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCCC GLFYKGLSPKNDAIRQLWEEVYIPYLNINKFAAEILIIFRVENRSDSGLRQAKDFLSQAE EEEECCCCCCCHHHHHHHHHHCCCCCCHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHH SLSEEIVRKLEHIKKMVIELDNQGISIFS HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]