Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
Click here to switch to the map view.
The map label for this gene is cheW [H]
Identifier: 15594910
GI number: 15594910
Start: 577395
End: 577937
Strand: Direct
Name: cheW [H]
Synonym: BB0565
Alternate gene names: 15594910
Gene position: 577395-577937 (Clockwise)
Preceding gene: 15594906
Following gene: 15594911
Centisome position: 63.4
GC content: 29.83
Gene sequence:
>543_bases ATGAGCACAGATTCAGATGTGCAAGATTCTTTAAGTCAGTATCTTTTATTTAGTTTGGACGAACTTTATGCTATTGAGAT TAAATATGTTGTTGAGGTTTTAGAATATACTAAGATATCAAAAATCCCAAGGACTCCCAATTACATGGCAGGAATAATAA ATAATAGGGGCAAAATCGTTCCAATAATTGATATTCGAAAACAATTTGGAATGAGCGATCGTGCTGTTGATGAGGATGAT AAAAAGAGGAATAAGGGAGTTAACATTTCAAATATTATTATATTGAATTTGGTTTACGAGGGGGATGAATTTAATCTTGG AATTTTAGTAGATTATGTCAATGAAGTTCTTGAATTAGATCCATTTAGTATTGATGATGCTCCTAAGATTGGATCAGGGT TTAATTCAAAATTTATTTCAGGAATTGGCAAGAGTAATGATAAGTTTATTATTATTTTAAATGTAGAAAATTTGTTTGAC GTTAGAGAGCTTTCTAAATTTAGAAATACAACAATATATGATCCTGAATATCAGCAGCAATAG
Upstream 100 bases:
>100_bases TTTTATTAACTTCTAATTTGTATTTATCAATATATGAGGTAATATTAATCTTGATATTAGCATTCTATTTGCGATTTAAA TTACATTCAAAGGGGCGTTT
Downstream 100 bases:
>100_bases GAGTTTTTAGTCATGATTTATAGGCCTGAAGGAGAGCTTGTAATAAATAGTATTTTTAAGGTAAAAGAAGATTTGTTGCA TATTTTTAAGAAAATGAAAG
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSTDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMAGIINNRGKIVPIIDIRKQFGMSDRAVDEDD KKRNKGVNISNIIILNLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNDKFIIILNVENLFD VRELSKFRNTTIYDPEYQQQ
Sequences:
>Translated_180_residues MSTDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMAGIINNRGKIVPIIDIRKQFGMSDRAVDEDD KKRNKGVNISNIIILNLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNDKFIIILNVENLFD VRELSKFRNTTIYDPEYQQQ >Mature_179_residues STDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMAGIINNRGKIVPIIDIRKQFGMSDRAVDEDDK KRNKGVNISNIIILNLVYEGDEFNLGILVDYVNEVLELDPFSIDDAPKIGSGFNSKFISGIGKSNDKFIIILNVENLFDV RELSKFRNTTIYDPEYQQQ
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=159, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 20588; Mature: 20456
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMAGIINNRGKIV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCEE PIIDIRKQFGMSDRAVDEDDKKRNKGVNISNIIILNLVYEGDEFNLGILVDYVNEVLELD EEEECHHHCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC PFSIDDAPKIGSGFNSKFISGIGKSNDKFIIILNVENLFDVRELSKFRNTTIYDPEYQQQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure STDSDVQDSLSQYLLFSLDELYAIEIKYVVEVLEYTKISKIPRTPNYMAGIINNRGKIV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCEE PIIDIRKQFGMSDRAVDEDDKKRNKGVNISNIIILNLVYEGDEFNLGILVDYVNEVLELD EEEECHHHCCCCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC PFSIDDAPKIGSGFNSKFISGIGKSNDKFIIILNVENLFDVRELSKFRNTTIYDPEYQQQ CCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]