Definition | Borrelia burgdorferi B31 chromosome, complete genome. |
---|---|
Accession | NC_001318 |
Length | 910,724 |
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The map label for this gene is nadE [H]
Identifier: 15594867
GI number: 15594867
Start: 532938
End: 533606
Strand: Direct
Name: nadE [H]
Synonym: BB0522
Alternate gene names: 15594867
Gene position: 532938-533606 (Clockwise)
Preceding gene: 15594866
Following gene: 15594868
Centisome position: 58.52
GC content: 28.4
Gene sequence:
>669_bases ATGCCTAGTAAATTTTCATCAGCAGGTTCTATTTCTGATGCTAAAGAACTTTCTAGAAAATTAGGTTTTAAATTGATTGA AATGCCAATAAAAGATTTATTTCAGGTAAGCAGTAGATTTTTTGAAGGATATTTTGATATTAAAGGTGTTACTGGAGAAA ATTTGCAAGCTCGGTTAAGAGGGCTTTTATTAATGTCTTATAGTAATTCTCAAAATTCTTTGCTTTTAAATACTGGTAAC AAAAGCGAAATTGCAGTTGGTTATTGTACCCTTTATGGGGATACTTGCGGAGGGCTTGCTTTGATCGGAGATCTTTTTAA GACTGAGGTTTATGATCTTGTAAATTATATTAATGCAAAATTTGACCAATGTATTATTCCTGTTAATATTATTTTAAAGG AGCCTTCAGCTGAGTTAAGGTTTGATCAAAAAGATAGTGATTATCTTCCAAAATATGAAGTTCTTGATGTTATTTTAAAT AGATATTTGATTGGCAATGAATCTGTAGATTCAATTTATCTTAATTTTGAAAAAGGTATAGTTGATAAAGTTTTAAATCT TTATTTTAAAAATGAATACAAAAGAAGACAGGGAGCTCCTATAGTTAAAGTTTCTGAAAAAACCTTTGGTTTTGAGCTTT CAATGCCTATTTTAAATAATATAATTTGA
Upstream 100 bases:
>100_bases TTCCAAAGTTCATTTGGGAGTATCTGGGGGTGTTGATTCTGCTCTTATTGCGTATCTTGCATGTTTTGCTTTGGGCGCTG AGAATGTTGTTGGGATTTCT
Downstream 100 bases:
>100_bases AATTATGATTGGAGCTTGAGATTTTGAAATTCTTTTCTTTTTTTAAATTTTATTAATAATATTTTTTGCTGGAAAAATTG AAAAATAGCTTTTTAAGTTA
Product: NH(3)-dependent NAD+ synthetase
Products: NA
Alternate protein names: NAD(+) synthase [glutamine-hydrolyzing] [H]
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPSKFSSAGSISDAKELSRKLGFKLIEMPIKDLFQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGN KSEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNYINAKFDQCIIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILN RYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILNNII
Sequences:
>Translated_222_residues MPSKFSSAGSISDAKELSRKLGFKLIEMPIKDLFQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGN KSEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNYINAKFDQCIIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILN RYLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILNNII >Mature_221_residues PSKFSSAGSISDAKELSRKLGFKLIEMPIKDLFQVSSRFFEGYFDIKGVTGENLQARLRGLLLMSYSNSQNSLLLNTGNK SEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNYINAKFDQCIIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILNR YLIGNESVDSIYLNFEKGIVDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILNNII
Specific function: Can use both glutamine or ammonia as a nitrogen source [H]
COG id: COG0171
COG function: function code H; NAD synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014445 - InterPro: IPR022310 - InterPro: IPR003694 - InterPro: IPR003010 - InterPro: IPR014729 [H]
Pfam domain/function: PF00795 CN_hydrolase; PF02540 NAD_synthase [H]
EC number: =6.3.5.1 [H]
Molecular weight: Translated: 25094; Mature: 24963
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSKFSSAGSISDAKELSRKLGFKLIEMPIKDLFQVSSRFFEGYFDIKGVTGENLQARLR CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH GLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNYINAK EEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC FDQCIIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGI CCCEEEEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH VDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILNNII HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCHHHHCCC >Mature Secondary Structure PSKFSSAGSISDAKELSRKLGFKLIEMPIKDLFQVSSRFFEGYFDIKGVTGENLQARLR CCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHH GLLLMSYSNSQNSLLLNTGNKSEIAVGYCTLYGDTCGGLALIGDLFKTEVYDLVNYINAK EEEEEEECCCCCEEEEECCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC FDQCIIPVNIILKEPSAELRFDQKDSDYLPKYEVLDVILNRYLIGNESVDSIYLNFEKGI CCCEEEEEEEEEECCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHHH VDKVLNLYFKNEYKRRQGAPIVKVSEKTFGFELSMPILNNII HHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEECCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]