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The map label for this gene is ypjC

Identifier: 255767485

GI number: 255767485

Start: 2360630

End: 2361502

Strand: Direct

Name: ypjC

Synonym: BSU22510

Alternate gene names: 255767485

Gene position: 2360630-2361502 (Clockwise)

Preceding gene: 16079289

Following gene: 255767491

Centisome position: 56.0

GC content: 42.73

Gene sequence:

>873_bases
ATGCTTGGAGAAATTAGATTAAAAAACATATTTTTTATTTTAATCGGAGCGGCAATTTTTTCATTTGGCTTGGTTCATTT
CAATATGCAGAACAATCTGGCTGAGGGCGGTTTTACAGGTATTACACTTTTGCTTTATGCCCTTTTCCACATCAGCCCCT
CTATATCGAACCTGGTGTTGAACATTCCGATTTTTTTTATTGGCTGGCGTTTGCTCGGCAGGACAATGTTTGTTTATACC
CTTGTCGGCACTGTAGCCTTGTCTTTGTTCCTCAGCATCTTTCAGCGATATGAAATCCATATGCCCCTTCAGCACGACTT
AGCGCTCGCCGCTTTATTTGCCGGCGTATTCATCGGAGCCGGACTGGGTATTATTTTTAAGTTCGGCGGTACGACAGGCG
GTGTTGATATCATCGCACGTTTAGTGAATAAGTATTTTGGGATTCCGATGGGCAGAACGATGTTTGCTTTCGATGCCTGC
GTCATCATTTTGTCTTTGCTTACTTATCTCTCCTATAAAGAAGCGATGTATACGCTGGTAGCTGTATTTGTAGCGGCAAG
ATTAATCGATTTTATTCAGGAAGGCGGATACGCTGCTAAAGGCGCTACGATCATCTCTTCGAAAAACGACCTGATTCAGA
AAAAGATTCTTGAAGAAATGGAACGGGGCGTCACCATTTTGAAAGGACAAGGTTCCTACACAAAAGAGGATATAGATGTA
CTTTATTGTGTGGTGCCGAAAAATGAATTGGTGATGCTGAAAAGCGTGATTAACTCCATTGATCCCCATGCCTTTGTAGC
GGTAAGCGATGTTCACGATGTGCTCGGAGAAGGATTTACGCTTGATGAAAATAAAAATCCGCTTCCGCGCTGA

Upstream 100 bases:

>100_bases
TTCAGATACGTTTGACAAATGTTTAAGCACGTTTGCTGTTTTCTTTTTCATCCACTATAATATAAACGCTATCTAATGGA
AGGAAAAGGGGTTTTGTGTG

Downstream 100 bases:

>100_bases
CATGTAATAGAAAAAAGGCGGCTGACCGCCGCCCCTCATCCTTATTTAGGGTAGTCCCTTTTTTTCAGCTTGTTTTTTTC
CGCCTTGTACTTTCTGTAAC

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFHISPSISNLVLNIPIFFIGWRLLGRTMFVYT
LVGTVALSLFLSIFQRYEIHMPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPMGRTMFAFDAC
VIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAKGATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDV
LYCVVPKNELVMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR

Sequences:

>Translated_290_residues
MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFHISPSISNLVLNIPIFFIGWRLLGRTMFVYT
LVGTVALSLFLSIFQRYEIHMPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPMGRTMFAFDAC
VIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAKGATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDV
LYCVVPKNELVMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR
>Mature_290_residues
MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFHISPSISNLVLNIPIFFIGWRLLGRTMFVYT
LVGTVALSLFLSIFQRYEIHMPLQHDLALAALFAGVFIGAGLGIIFKFGGTTGGVDIIARLVNKYFGIPMGRTMFAFDAC
VIILSLLTYLSYKEAMYTLVAVFVAARLIDFIQEGGYAAKGATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDV
LYCVVPKNELVMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPJC_BACSU (P42978)

Other databases:

- EMBL:   L38424
- EMBL:   L47709
- EMBL:   AL009126
- PIR:   C69937
- RefSeq:   NP_390132.2
- ProteinModelPortal:   P42978
- SMR:   P42978
- EnsemblBacteria:   EBBACT00000002018
- GeneID:   939023
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22510
- NMPDR:   fig|224308.1.peg.2255
- GenoList:   BSU22510
- GeneTree:   EBGT00070000031915
- HOGENOM:   HBG475521
- ProtClustDB:   CLSK929447
- BioCyc:   BSUB:BSU22510-MONOMER
- InterPro:   IPR003740
- InterPro:   IPR019264

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179

EC number: NA

Molecular weight: Translated: 31961; Mature: 31961

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10781378)-; HASH(0x107e1490)-; HASH(0x103c0968)-; HASH(0x103cb154)-; HASH(0x107d98cc)-; HASH(0x107e14f0)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFHISPSISNLVL
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
NIPIFFIGWRLLGRTMFVYTLVGTVALSLFLSIFQRYEIHMPLQHDLALAALFAGVFIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GLGIIFKFGGTTGGVDIIARLVNKYFGIPMGRTMFAFDACVIILSLLTYLSYKEAMYTLV
CHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFVAARLIDFIQEGGYAAKGATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDV
HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE
LYCVVPKNELVMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR
EEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCEECCCCCCCCH
>Mature Secondary Structure
MLGEIRLKNIFFILIGAAIFSFGLVHFNMQNNLAEGGFTGITLLLYALFHISPSISNLVL
CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
NIPIFFIGWRLLGRTMFVYTLVGTVALSLFLSIFQRYEIHMPLQHDLALAALFAGVFIGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GLGIIFKFGGTTGGVDIIARLVNKYFGIPMGRTMFAFDACVIILSLLTYLSYKEAMYTLV
CHHEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVFVAARLIDFIQEGGYAAKGATIISSKNDLIQKKILEEMERGVTILKGQGSYTKEDIDV
HHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEE
LYCVVPKNELVMLKSVINSIDPHAFVAVSDVHDVLGEGFTLDENKNPLPR
EEEEECCCHHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCEECCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377