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The map label for this gene is yvdS

Identifier: 16080502

GI number: 16080502

Start: 3541488

End: 3541823

Strand: Direct

Name: yvdS

Synonym: BSU34490

Alternate gene names: 16080502

Gene position: 3541488-3541823 (Clockwise)

Preceding gene: 16080501

Following gene: 16080503

Centisome position: 84.01

GC content: 42.86

Gene sequence:

>336_bases
TTGAATTGGGTTCTTGTTTTTATTGCAGGGCTTTTAGAGGTTGTTTGGGCCTCTTCCCTCAAACATGCCGATTCGCTTTT
GGATTGGATCATCATTTTTATCTTAATCGCGGTCAGCTTTATCCTGTTGATCCGCTCTTATCAAAAAATCCCGATGGCCG
CGGCGTACACTGTGTTTGTGGGAATCGGAACCGTCGGAACATATCTGACTGGAATTGTTCTGGGCGAATCCTTCTCAGCA
GCCCAAATGTTCTTTTTAGCTTTATTGCTGGCTGGCATTTTAGGAATGAAATTATTTACGAAAGAAAGCAAATCTCAGCC
GGGAGGTGAAAAATAA

Upstream 100 bases:

>100_bases
GAGCTTAGGTACTGCTTAAAAAATGACTGGGTAACACCGCTCATTTTTTAATGCCCTAAAAATGACTGACGTTCATTCAT
AAAATAGAGAGGTGTTTCAT

Downstream 100 bases:

>100_bases
TGGCATGGTTTTTATTAGTGATTGCCGGCATAGAAGAAATTATAGCTGCCATTGCCATGAAATATATAGACGGAACAAGA
AAAAAATGGCCGATCATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKIPMAAAYTVFVGIGTVGTYLTGIVLGESFSA
AQMFFLALLLAGILGMKLFTKESKSQPGGEK

Sequences:

>Translated_111_residues
MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKIPMAAAYTVFVGIGTVGTYLTGIVLGESFSA
AQMFFLALLLAGILGMKLFTKESKSQPGGEK
>Mature_111_residues
MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKIPMAAAYTVFVGIGTVGTYLTGIVLGESFSA
AQMFFLALLLAGILGMKLFTKESKSQPGGEK

Specific function: Suppresses A Groel Mutation And Mimics The Effect Of Groe Overexpression. Could Act As A Chaperone. [C]

COG id: COG2076

COG function: function code P; Membrane transporters of cations and cationic drugs

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small multidrug resistance (SMR) protein family

Homologues:

Organism=Escherichia coli, GI87082378, Length=105, Percent_Identity=43.8095238095238, Blast_Score=73, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YVDS_BACSU (O32262)

Other databases:

- EMBL:   Z94043
- EMBL:   AL009126
- PIR:   B70035
- RefSeq:   NP_391329.1
- ProteinModelPortal:   O32262
- EnsemblBacteria:   EBBACT00000002716
- GeneID:   936401
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU34490
- NMPDR:   fig|224308.1.peg.3455
- GenoList:   BSU34490
- GeneTree:   EBGT00050000001579
- HOGENOM:   HBG740972
- OMA:   LEVVWAS
- ProtClustDB:   CLSK887923
- BioCyc:   BSUB:BSU34490-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000390

Pfam domain/function: PF00893 Multi_Drug_Res

EC number: NA

Molecular weight: Translated: 12086; Mature: 12086

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12578a5c)-; HASH(0x10e39e7c)-; HASH(0x11bb30ac)-; HASH(0x1252cc2c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKIPMAAAYTVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIGTVGTYLTGIVLGESFSAAQMFFLALLLAGILGMKLFTKESKSQPGGEK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MNWVLVFIAGLLEVVWASSLKHADSLLDWIIIFILIAVSFILLIRSYQKIPMAAAYTVFV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
GIGTVGTYLTGIVLGESFSAAQMFFLALLLAGILGMKLFTKESKSQPGGEK
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377