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The map label for this gene is sdpA

Identifier: 16080428

GI number: 16080428

Start: 3464289

End: 3464765

Strand: Direct

Name: sdpA

Synonym: BSU33750

Alternate gene names: 16080428

Gene position: 3464289-3464765 (Clockwise)

Preceding gene: 255767767

Following gene: 16080429

Centisome position: 82.18

GC content: 30.19

Gene sequence:

>477_bases
ATGACTATATGTTTCCTATTATTTTCTTCTTATTACTTTAGCAATATTTCACCTCAGAATCCACTGTTCAAAAAAAATTT
TTTGCAACAATTGTCTCCCCAAGGCTTTGGCTTTTATAGTAAAAGCCCTACAGAAGAAAACATTTCATTTCACACAAAAG
AAAATTTAAAGTTACCTAATGCACTTCCCAATAATTTTTTTGGGATAAAAAGAGAAGGAAGAGTTCAGGCAATAGAATTA
GGCAAAATTGTAGAGAATATCGATCCAAAGAATTGGAAAACTTGTGAAAACAACAACTCCTGCACAAATTTAGAGAAACA
AATAAAGCCTATTAAGGTTATAAAAAATGAAGATTATATACATCTTAGCAAAGGAGAATACCTAATATATCGCCAAAAAC
CACTCTCATGGTATTGGATAGACTTTAAGCAAACTACCTCTTTTGAAAGAAAGGTGCTAAAAATAAAAATAGTATGA

Upstream 100 bases:

>100_bases
TTGTTGATTATTCTGACTAGCTATTATATAATCTTTTTGAAATGATTATATTAGCTTAGAGGAGGTAATCTACATCAAAA
AAAAGGGAATTATTACTGTA

Downstream 100 bases:

>100_bases
AGATATTAAATAGTTTAGAAGGTTATATTGACACCTATAATCCATGGAAAAATACATATGCACTTTTTAGAAGTTTACTT
GGTTTCTCAACATTACTAGT

Product: export of killing factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTICFLLFSSYYFSNISPQNPLFKKNFLQQLSPQGFGFYSKSPTEENISFHTKENLKLPNALPNNFFGIKREGRVQAIEL
GKIVENIDPKNWKTCENNNSCTNLEKQIKPIKVIKNEDYIHLSKGEYLIYRQKPLSWYWIDFKQTTSFERKVLKIKIV

Sequences:

>Translated_158_residues
MTICFLLFSSYYFSNISPQNPLFKKNFLQQLSPQGFGFYSKSPTEENISFHTKENLKLPNALPNNFFGIKREGRVQAIEL
GKIVENIDPKNWKTCENNNSCTNLEKQIKPIKVIKNEDYIHLSKGEYLIYRQKPLSWYWIDFKQTTSFERKVLKIKIV
>Mature_157_residues
TICFLLFSSYYFSNISPQNPLFKKNFLQQLSPQGFGFYSKSPTEENISFHTKENLKLPNALPNNFFGIKREGRVQAIELG
KIVENIDPKNWKTCENNNSCTNLEKQIKPIKVIKNEDYIHLSKGEYLIYRQKPLSWYWIDFKQTTSFERKVLKIKIV

Specific function: Required for the maturation of sdpC

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SDPA_BACSU (O34889)

Other databases:

- EMBL:   AB006738
- EMBL:   AL009126
- PIR:   H70028
- RefSeq:   NP_391255.1
- EnsemblBacteria:   EBBACT00000001753
- GeneID:   938629
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33750
- NMPDR:   fig|224308.1.peg.3381
- GenoList:   BSU33750
- GeneTree:   EBGT00050000005979
- BioCyc:   BSUB:BSU33750-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18651; Mature: 18520

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTICFLLFSSYYFSNISPQNPLFKKNFLQQLSPQGFGFYSKSPTEENISFHTKENLKLPN
CEEEEEEHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
ALPNNFFGIKREGRVQAIELGKIVENIDPKNWKTCENNNSCTNLEKQIKPIKVIKNEDYI
CCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCEE
HLSKGEYLIYRQKPLSWYWIDFKQTTSFERKVLKIKIV
EECCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEEC
>Mature Secondary Structure 
TICFLLFSSYYFSNISPQNPLFKKNFLQQLSPQGFGFYSKSPTEENISFHTKENLKLPN
EEEEEEHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCC
ALPNNFFGIKREGRVQAIELGKIVENIDPKNWKTCENNNSCTNLEKQIKPIKVIKNEDYI
CCCCCCCCCCCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCEE
HLSKGEYLIYRQKPLSWYWIDFKQTTSFERKVLKIKIV
EECCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377