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The map label for this gene is gerAB

Identifier: 16080359

GI number: 16080359

Start: 3392199

End: 3393296

Strand: Direct

Name: gerAB

Synonym: BSU33060

Alternate gene names: 16080359

Gene position: 3392199-3393296 (Clockwise)

Preceding gene: 255767754

Following gene: 16080360

Centisome position: 80.47

GC content: 40.53

Gene sequence:

>1098_bases
ATGAGCCAAAAACAGACTCCACTGAAACTTAATACCTTTCAAGGTATTTCTATTGTTGCAAATACAATGCTTGGGGCCGG
ACTTTTAACATTGCCGCGAGCGCTGACCACTAAGGCTAATACGCCTGACGGCTGGATCACGCTGATATTAGAAGGTTTCA
TTTTTATTTTCTTCATTTATTTAAACACGCTCATTCAGAAAAAACATCAATACCCTTCACTCTTTGAATATTTGAAGGAA
GGGCTTGGGAAATGGATCGGCAGCATCATCGGCCTTTTGATCTGCGGCTATTTCCTCGGCGTAGCCAGCTTCGAGACACG
GGCAATGGCTGAAATGGTGAAGTTTTTCCTGCTGGAGAGAACCCCAATTCAAGTCATTATTTTAACGTTTATTTGCTGCG
GCATTTATTTAATGGTTGGGGGCTTAAGCGATGTGTCGCGGCTGTTTCCCTTTTATTTAACGGTAACCATTATTATTTTG
CTGATTGTGTTCGGGATCAGTTTTAAAATTTTTGATATCAATAATTTGCGTCCTGTTTTAGGCGAAGGCCTTGGACCCAT
TGCAAACTCCCTTACCGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAA
AGAAATACACGTTCAGATATGCGTCTCTAGGATTTCTGATTCCGATTATCTTATATATCCTTACGTATATTATCGTTGTC
GGAGCTTTGACCGCTCCCGAGGTGAAAACGCTGATTTGGCCGACTATTTCTCTCTTTCAGTCCTTTGAGCTTAAAGGCAT
ATTTATTGAACGGTTTGAATCCTTTTTACTGGTGGTCTGGATTATCCAGTTTTTCACCACATTTGTCATTTACGGATACT
TTGCCGCTAACGGGCTAAAGAAGACATTTGGATTATCGACTAAAACAAGCATGGTGATTATCGGCATAACGGTCTTTTAT
TTTTCTCTCTGGCCGGATGACGCCAATCAAGTCATGATGTATAGCGATTATCTTGGCTATATTTTTGTCTCCCTGTTTCT
GCTTCCGTTCATTCTCTTTTTCATTGTAGCTCTCAAGAGGAGGATTACAACAAAATGA

Upstream 100 bases:

>100_bases
CCGTATTTTTCGCCAAACGGATTCTTTAGCCTGAAAAATACGGATGACTCCATTATCCGTCTCCCAATTAAAAACAAACC
AAAAGAGGTGAATAATCCAA

Downstream 100 bases:

>100_bases
AAATCCGGATTTTATGTATGTTTATATGCACCCTATTGCTGTCCGGATGCTGGGACAGTGAGAATATCGAGGAATTAAGC
TTAGTGATCGGAATAGGGCT

Product: germination receptor GerA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 364

Protein sequence:

>365_residues
MSQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLILEGFIFIFFIYLNTLIQKKHQYPSLFEYLKE
GLGKWIGSIIGLLICGYFLGVASFETRAMAEMVKFFLLERTPIQVIILTFICCGIYLMVGGLSDVSRLFPFYLTVTIIIL
LIVFGISFKIFDINNLRPVLGEGLGPIANSLTVVSISFLGMEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVV
GALTAPEVKTLIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGLKKTFGLSTKTSMVIIGITVFY
FSLWPDDANQVMMYSDYLGYIFVSLFLLPFILFFIVALKRRITTK

Sequences:

>Translated_365_residues
MSQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLILEGFIFIFFIYLNTLIQKKHQYPSLFEYLKE
GLGKWIGSIIGLLICGYFLGVASFETRAMAEMVKFFLLERTPIQVIILTFICCGIYLMVGGLSDVSRLFPFYLTVTIIIL
LIVFGISFKIFDINNLRPVLGEGLGPIANSLTVVSISFLGMEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVV
GALTAPEVKTLIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGLKKTFGLSTKTSMVIIGITVFY
FSLWPDDANQVMMYSDYLGYIFVSLFLLPFILFFIVALKRRITTK
>Mature_364_residues
SQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLILEGFIFIFFIYLNTLIQKKHQYPSLFEYLKEG
LGKWIGSIIGLLICGYFLGVASFETRAMAEMVKFFLLERTPIQVIILTFICCGIYLMVGGLSDVSRLFPFYLTVTIIILL
IVFGISFKIFDINNLRPVLGEGLGPIANSLTVVSISFLGMEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVVG
ALTAPEVKTLIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGLKKTFGLSTKTSMVIIGITVFYF
SLWPDDANQVMMYSDYLGYIFVSLFLLPFILFFIVALKRRITTK

Specific function: Involved in the germinative response to L-alanine. Could be an amino acid transporter. Forms a complex at the inner spore membrane which acts as a receptor for L-alanine, thus is involved in the stimulation of germination in response to alanine. Can stimu

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. Spore germination protein (SGP) (TC 2.A.3.9) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GERAB_BACSU (P07869)

Other databases:

- EMBL:   M16189
- EMBL:   AJ223978
- EMBL:   AL009126
- PIR:   F69629
- RefSeq:   NP_391186.1
- ProteinModelPortal:   P07869
- EnsemblBacteria:   EBBACT00000002292
- GeneID:   935948
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU33060
- NMPDR:   fig|224308.1.peg.3312
- GenoList:   BSU33060
- GeneTree:   EBGT00070000031777
- HOGENOM:   HBG338370
- OMA:   LEIVIER
- ProtClustDB:   CLSK887855
- BioCyc:   BSUB:BSU33060-MONOMER
- InterPro:   IPR004761
- TIGRFAMs:   TIGR00912

Pfam domain/function: PF03845 Spore_permease

EC number: NA

Molecular weight: Translated: 41460; Mature: 41328

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11edb880)-; HASH(0x10f4e310)-; HASH(0xd1d9430)-; HASH(0x125e6e80)-; HASH(0x1258c588)-; HASH(0x11e0f518)-; HASH(0x11e2d404)-; HASH(0x11ae39cc)-; HASH(0x1262350c)-; HASH(0x11bb21c4)-; HASH(0xd148af0)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLILEGFIFIFFIY
CCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LNTLIQKKHQYPSLFEYLKEGLGKWIGSIIGLLICGYFLGVASFETRAMAEMVKFFLLER
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TPIQVIILTFICCGIYLMVGGLSDVSRLFPFYLTVTIIILLIVFGISFKIFDINNLRPVL
CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHH
GEGLGPIANSLTVVSISFLGMEVMLFLPEHMKKKKYTFRYASLGFLIPIILYILTYIIVV
HCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GALTAPEVKTLIWPTISLFQSFELKGIFIERFESFLLVVWIIQFFTTFVIYGYFAANGLK
HCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KTFGLSTKTSMVIIGITVFYFSLWPDDANQVMMYSDYLGYIFVSLFLLPFILFFIVALKR
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RITTK
HHCCH
>Mature Secondary Structure 
SQKQTPLKLNTFQGISIVANTMLGAGLLTLPRALTTKANTPDGWITLILEGFIFIFFIY
CCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH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HHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 3110007; 9639930; 9384377; 8382989