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The map label for this gene is ytaB

Identifier: 16080145

GI number: 16080145

Start: 3163237

End: 3163704

Strand: Direct

Name: ytaB

Synonym: BSU30930

Alternate gene names: 16080145

Gene position: 3163237-3163704 (Clockwise)

Preceding gene: 16080144

Following gene: 16080151

Centisome position: 75.04

GC content: 42.95

Gene sequence:

>468_bases
ATGAAAAAGATTGTCGGCGCTTTAGCCGTTTTTGTGATTACATATGCGCTGTTTTCAGCCGCAGGCTACCTGTTTCCTGT
GGACCAAGAATGGTACAATTCATTGAAAAAACCGGACTGGACGCCAAGCGGAACTGCGATCGGCATCATTTGGGCCATCC
TGTTTGCCCTGATCTCCCTTTCAGCAGCCATTGTATATGCTGCGTTTTCATTTAAAGGTGCGAAAAGCTTTTGGTTTACA
CTTTTGATAAATTACGTGCTCAATCAAGCCTTCAGCTATTTCCAGTTTACGCAAAAAAATCTGCTGGCTGCATCGCTTGA
CTGCCTGCTTGTCGCCATCACAGCAATCGTATTACTGATCATTGCCAAAAAATACAGCAGAGCCGCAAGCTATCTTCTTT
TGCCTTATTTTTTATGGAGTGCATTTGCGACGTTCTTATCCTTTACAATCAATTCAATGAATCTGTGA

Upstream 100 bases:

>100_bases
GCATTGCGGCAGCTTATTTAAGACCATCATTTCCCCCGCATATCGGGGGTTTGATATTTATAAGATAAAGGGTAATTAAA
TACATGCGGAGGTTGCAAAT

Downstream 100 bases:

>100_bases
ACAAAAAAAGCCGCTTATACAGCGGCTTTTTCACATCATCGGCTTGATGCCCCAAATGTCCTTCGCATATTCCCGGATCG
TGCGGTCGCTGGAGAAATAT

Product: receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKKIVGALAVFVITYALFSAAGYLFPVDQEWYNSLKKPDWTPSGTAIGIIWAILFALISLSAAIVYAAFSFKGAKSFWFT
LLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLIIAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL

Sequences:

>Translated_155_residues
MKKIVGALAVFVITYALFSAAGYLFPVDQEWYNSLKKPDWTPSGTAIGIIWAILFALISLSAAIVYAAFSFKGAKSFWFT
LLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLIIAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL
>Mature_155_residues
MKKIVGALAVFVITYALFSAAGYLFPVDQEWYNSLKKPDWTPSGTAIGIIWAILFALISLSAAIVYAAFSFKGAKSFWFT
LLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLIIAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL

Specific function: Unknown

COG id: COG3476

COG function: function code T; Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TspO/BZRP family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YTAB_BACSU (O34694)

Other databases:

- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   G69987
- RefSeq:   NP_390971.1
- ProteinModelPortal:   O34694
- EnsemblBacteria:   EBBACT00000002490
- GeneID:   938164
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU30930
- NMPDR:   fig|224308.1.peg.3096
- GenoList:   BSU30930
- GeneTree:   EBGT00050000001622
- HOGENOM:   HBG753165
- OMA:   KPPDWAF
- ProtClustDB:   CLSK887771
- BioCyc:   BSUB:BSU30930-MONOMER
- InterPro:   IPR004307
- PANTHER:   PTHR10057
- PIRSF:   PIRSF005859

Pfam domain/function: PF03073 TspO_MBR

EC number: NA

Molecular weight: Translated: 17289; Mature: 17289

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe5ec660)-; HASH(0x103426d4)-; HASH(0x1163292c)-; HASH(0x119988ac)-; HASH(0x10ee709c)-;

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIVGALAVFVITYALFSAAGYLFPVDQEWYNSLKKPDWTPSGTAIGIIWAILFALISL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
SAAIVYAAFSFKGAKSFWFTLLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MKKIVGALAVFVITYALFSAAGYLFPVDQEWYNSLKKPDWTPSGTAIGIIWAILFALISL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
SAAIVYAAFSFKGAKSFWFTLLINYVLNQAFSYFQFTQKNLLAASLDCLLVAITAIVLLI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAKKYSRAASYLLLPYFLWSAFATFLSFTINSMNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377