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The map label for this gene is acuB

Identifier: 16080022

GI number: 16080022

Start: 3040751

End: 3041395

Strand: Direct

Name: acuB

Synonym: BSU29700

Alternate gene names: 16080022

Gene position: 3040751-3041395 (Clockwise)

Preceding gene: 16080021

Following gene: 16080023

Centisome position: 72.13

GC content: 44.03

Gene sequence:

>645_bases
ATGATTGTTGAGCAAATCATGAAAAGAGATGTCATTACATTAACGAAGACGGATACGCTTGAAACAGCAATATGCAAACT
GAAGGAATTCCATATCAGGCATCTGCCTGTTGTAGATGAAGAACGACACGTGATCGGCATGATTACAGACAGGGACATGA
AACAGGCCAGCCCGAGTATTTTTGAAGAAAACAAACGAAGCCTATTTCTCACACGAAGCGTAGATTCAATTATGAAAAAG
GATGTTGTCTGCGCCCACCCGTTAGATTTTGTCGAAGAAATATCAGCCGTGTTCTACGAGCATGGCATCGGCTGCCTACC
AGTGGTACACCATCAAAAATTAATAGGCATTTTAACAAAAACCGATTTGCTGCGGACGTTTGTCAAATTGACAGGCGCTG
ACCAGCCGGGCTCGCAAATTGAGATAAAAGTAAACGACATCACCAAAAGCCTCGCTGAGATCAGCAGTCTTTGCCAAGAC
CTTCAAGTGAAAATATTAAGCGTGCTTGTTTATCCGCATGACGATCCCGGTGTAAAAGTGCTTGTCTTCCGTGTAAAAAC
GATGAATCCGCTGCCGTTTTTGCAGGCATTACAAAGAAATGGACACCACGTCGTATGGCCGTCAGAGCAAAGGGATCTGC
TATGA

Upstream 100 bases:

>100_bases
TTGGAAAAAACGTCAGCCAAGAATCAATTGAGCAATTTGACAGGCTCCGTTTTTATCATCGTTATATGTATTAACTGACA
CTGACAAAGGGGAAAAAATA

Downstream 100 bases:

>100_bases
GAGACAGTGTATTTATCTATTCTCCATCCTACCAAACCTATATGTTTCATCAGGAGCATCCCTTTAATCAGCAGCGGGTT
CTGTTAACATATGATTTGCT

Product: acetoin degradation regulation pathway protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDSIMKK
DVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTKTDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQD
LQVKILSVLVYPHDDPGVKVLVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL

Sequences:

>Translated_214_residues
MIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDSIMKK
DVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTKTDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQD
LQVKILSVLVYPHDDPGVKVLVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL
>Mature_214_residues
MIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDSIMKK
DVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTKTDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQD
LQVKILSVLVYPHDDPGVKVLVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL

Specific function: Role in growth and sporulation on acetoin or butanediol. Involved in the breakdown of these compounds used as a carbon source

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACUB_BACSU (P39066)

Other databases:

- EMBL:   L17309
- EMBL:   AF008220
- EMBL:   AL009126
- PIR:   S39644
- RefSeq:   NP_390848.1
- ProteinModelPortal:   P39066
- SMR:   P39066
- EnsemblBacteria:   EBBACT00000003025
- GeneID:   937318
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU29700
- NMPDR:   fig|224308.1.peg.2973
- GenoList:   BSU29700
- GeneTree:   EBGT00050000000992
- HOGENOM:   HBG712566
- OMA:   VENIDHE
- ProtClustDB:   CLSK887727
- BioCyc:   BSUB:BSU29700-MONOMER
- InterPro:   IPR013785
- InterPro:   IPR000644
- Gene3D:   G3DSA:3.20.20.70
- SMART:   SM00116

Pfam domain/function: PF00571 CBS

EC number: NA

Molecular weight: Translated: 24352; Mature: 24352

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS51371 CBS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSI
CCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHCCCHH
FEENKRSLFLTRSVDSIMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTK
HHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQDLQVKILSVLVYPHDDPGVKV
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEE
LVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL
EEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCC
>Mature Secondary Structure
MIVEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSI
CCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHCCCHH
FEENKRSLFLTRSVDSIMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVVHHQKLIGILTK
HHCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
TDLLRTFVKLTGADQPGSQIEIKVNDITKSLAEISSLCQDLQVKILSVLVYPHDDPGVKV
HHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEE
LVFRVKTMNPLPFLQALQRNGHHVVWPSEQRDLL
EEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377