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The map label for this gene is yomH

Identifier: 16079195

GI number: 16079195

Start: 2256062

End: 2256820

Strand: Direct

Name: yomH

Synonym: BSU21360

Alternate gene names: 16079195

Gene position: 2256062-2256820 (Clockwise)

Preceding gene: 255767473

Following gene: 16079196

Centisome position: 53.52

GC content: 31.62

Gene sequence:

>759_bases
ATGATTAGAGAAAGTCAATACTTTATGTTCAATAATATCCCTTCTTATGAATTAGGAGCCGTAAATGTAAATACAGAAGG
AGGACTTTTAGAGGAGTCGTTTATTGCAAATAGAACAGTAAATGAAACATACACTAGGCTATCTTCAGAACCATATGTAG
ACAATGTCAAACTTGAGCCATATGAGATCCCATTGAATTTTTACATAGAAAATCATCTAGATGAAAAAAATGTTCGAAGA
GTTGCTCGTTGGTTAAATGTAGATGATTATAAACCTCTCTCCTTTAGTAGAAATTTAGACATAATTTATTTTGCCTTGCC
AATAAACGCTACAGATTTAGTTCATAACTGTTCTAACGATGGATATGTGAAGCTCACAATGAAGGTATTCCCCTATAAAT
ATGGACAAGAAACAACAACTCATTGGTTTGATGTCACATCAGGTGTTAAGAATATTGAAATTGAAAACATAGGAGATGTG
GACATTCCGTTATCTCTTGAATTTAAGAAGATAGGCGACGGTGACATAACTGTTGAGAACTTAACTTTATATAGAACACC
TCTGAAGTTTACGGGAATAAAACATCATGAAGTTATCAATGTTGATTCCAATAAAAAATTGATCACTTCAAGTATTTCGG
GTTATGAATGTTATGACCAAGTAAATGAAGAGTATGTGATTTTAACAAGAGGTAAAAACAGAATTAAAATAAATGGTGAG
TGCTATATTCGATTAAAATACCGATACAAATATTTATAG

Upstream 100 bases:

>100_bases
TGTTTGAAAGCATTAAAAACGAAGTTGTAAAACTAAATGGTAGCATGTAAGAGTCTGCAAAAGCAGACTCTTTATTTAAC
TTAACTTGAGGTGGAAACTC

Downstream 100 bases:

>100_bases
GAGGATGTATTTTGTTAAATAAGTTTAAACCAGGCGAAATCCTCCTTTCTTTAGCAAAACCAAATAAAAAGAAAATCGCT
AATATTGCGGATTTCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MIRESQYFMFNNIPSYELGAVNVNTEGGLLEESFIANRTVNETYTRLSSEPYVDNVKLEPYEIPLNFYIENHLDEKNVRR
VARWLNVDDYKPLSFSRNLDIIYFALPINATDLVHNCSNDGYVKLTMKVFPYKYGQETTTHWFDVTSGVKNIEIENIGDV
DIPLSLEFKKIGDGDITVENLTLYRTPLKFTGIKHHEVINVDSNKKLITSSISGYECYDQVNEEYVILTRGKNRIKINGE
CYIRLKYRYKYL

Sequences:

>Translated_252_residues
MIRESQYFMFNNIPSYELGAVNVNTEGGLLEESFIANRTVNETYTRLSSEPYVDNVKLEPYEIPLNFYIENHLDEKNVRR
VARWLNVDDYKPLSFSRNLDIIYFALPINATDLVHNCSNDGYVKLTMKVFPYKYGQETTTHWFDVTSGVKNIEIENIGDV
DIPLSLEFKKIGDGDITVENLTLYRTPLKFTGIKHHEVINVDSNKKLITSSISGYECYDQVNEEYVILTRGKNRIKINGE
CYIRLKYRYKYL
>Mature_252_residues
MIRESQYFMFNNIPSYELGAVNVNTEGGLLEESFIANRTVNETYTRLSSEPYVDNVKLEPYEIPLNFYIENHLDEKNVRR
VARWLNVDDYKPLSFSRNLDIIYFALPINATDLVHNCSNDGYVKLTMKVFPYKYGQETTTHWFDVTSGVKNIEIENIGDV
DIPLSLEFKKIGDGDITVENLTLYRTPLKFTGIKHHEVINVDSNKKLITSSISGYECYDQVNEEYVILTRGKNRIKINGE
CYIRLKYRYKYL

Specific function: Unknown

COG id: COG4722

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOMH_BACSU (O31977)

Other databases:

- EMBL:   AL009126
- RefSeq:   NP_390019.1
- ProteinModelPortal:   O31977
- EnsemblBacteria:   EBBACT00000002823
- GeneID:   939139
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21360
- NMPDR:   fig|224308.1.peg.2142
- GenoList:   BSU21360
- ProtClustDB:   CLSK2518242
- BioCyc:   BSUB:BSU21360-MONOMER
- InterPro:   IPR008841

Pfam domain/function: PF05709 Sipho_tail

EC number: NA

Molecular weight: Translated: 29407; Mature: 29407

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRESQYFMFNNIPSYELGAVNVNTEGGLLEESFIANRTVNETYTRLSSEPYVDNVKLEP
CCCCCEEEEECCCCCCEEEEEEECCCCCEECHHHHCCCCCCHHHHHCCCCCCCCCEEECE
YEIPLNFYIENHLDEKNVRRVARWLNVDDYKPLSFSRNLDIIYFALPINATDLVHNCSND
EEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEECCCHHHHHHCCCCC
GYVKLTMKVFPYKYGQETTTHWFDVTSGVKNIEIENIGDVDIPLSLEFKKIGDGDITVEN
CEEEEEEEEECEECCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEE
LTLYRTPLKFTGIKHHEVINVDSNKKLITSSISGYECYDQVNEEYVILTRGKNRIKINGE
EEEEECCCEECCCCCEEEEEECCCCEEEEECCCCEEHHHHCCCCEEEEECCCCEEEECCE
CYIRLKYRYKYL
EEEEEEEEEECC
>Mature Secondary Structure
MIRESQYFMFNNIPSYELGAVNVNTEGGLLEESFIANRTVNETYTRLSSEPYVDNVKLEP
CCCCCEEEEECCCCCCEEEEEEECCCCCEECHHHHCCCCCCHHHHHCCCCCCCCCEEECE
YEIPLNFYIENHLDEKNVRRVARWLNVDDYKPLSFSRNLDIIYFALPINATDLVHNCSND
EEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCEECCCCEEEEEEECCCHHHHHHCCCCC
GYVKLTMKVFPYKYGQETTTHWFDVTSGVKNIEIENIGDVDIPLSLEFKKIGDGDITVEN
CEEEEEEEEECEECCCCCCEEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEE
LTLYRTPLKFTGIKHHEVINVDSNKKLITSSISGYECYDQVNEEYVILTRGKNRIKINGE
EEEEECCCEECCCCCEEEEEECCCCEEEEECCCCEEHHHHCCCCEEEEECCCCEEEECCE
CYIRLKYRYKYL
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377