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The map label for this gene is 15607125

Identifier: 15607125

GI number: 15607125

Start: 1544316

End: 1545014

Strand: Direct

Name: 15607125

Synonym: aq_2194

Alternate gene names: NA

Gene position: 1544316-1545014 (Clockwise)

Preceding gene: 15607124

Following gene: 15607129

Centisome position: 99.55

GC content: 41.2

Gene sequence:

>699_bases
ATGAAACTACTCTTTTCCTTCCTTTTCCTAATAACTTTTTTATTGGCCCAAACGGGAAGTACAGGAATTCCCCCGAATGA
AGCCAAAACACTCGGAACATACGTTCCAGGTGATATTACCTTAGTGGATTCCTACGGAAATGAGTTCCAGTTGAAGAATC
TCAAGGGAAAACCGATTATACTAAGCCCAATATACACCCACTGCAGAGCAGCATGTCCTTTAATTACTAAGAGTCTTTTA
AAGGTTATCCCTAAGCTCGGGACTCCGGGAAAGGATTTCTGGGTAATTACATTCACCTTTGATCCGAAAGATACACTTGA
AGATATTAAAAGGTTTCAAAAAGAGTATGGCATAGACGGGAAAGGCTGGAAAGTTGTAAAGGCTAAAACGAGTGAAGATT
TATTTAAGCTTCTAGACGCGATAGACTTCAGGTTTATGACGGCTGGAAACGACTTTATTCACCCGAATGTCGTAGTGGTT
CTCTCACCAGAACTCCAGATAAAGGACTACATATACGGTGTGAATTACAATTACTTGGAATTCGTAAACGCTCTTAGACT
TGCAAGAGGAGAAACCGCACTACCTGAAGGTTTCAGGTCCTACCTCTTCATTATTGGAATGGTAGGACTGGTAGGTACCA
GCGTTTACATAATGTACCTCTTGAACAGGATACTTCAAAAGAGGAAGAAGGCCGCGTAA

Upstream 100 bases:

>100_bases
ACAACGAAAAGTTCCCGATGCCTCTGAAACAGCTCCAAGGTGCTGAAAAGAAAGAAGAAAAGAAAGAACTCTCAAAAGCT
GAAGGGGGTATCACTCAGAA

Downstream 100 bases:

>100_bases
ACGAGACCTATTAAAATCCTGTAAAATCCGAAAATCTTTAAGCTATGACTTTTTAAGAAATTTAGAAACCACTTGACTAC
GATGAGTGCAGTAATAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Electron Transport /SenC; SenC/PrrC; Cytochrome C Oxidase Synthesis Factor; SenC/PrrC-Like; SCO1/SenC Family Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKLLFSFLFLITFLLAQTGSTGIPPNEAKTLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLL
KVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVV
LSPELQIKDYIYGVNYNYLEFVNALRLARGETALPEGFRSYLFIIGMVGLVGTSVYIMYLLNRILQKRKKAA

Sequences:

>Translated_232_residues
MKLLFSFLFLITFLLAQTGSTGIPPNEAKTLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLL
KVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVV
LSPELQIKDYIYGVNYNYLEFVNALRLARGETALPEGFRSYLFIIGMVGLVGTSVYIMYLLNRILQKRKKAA
>Mature_232_residues
MKLLFSFLFLITFLLAQTGSTGIPPNEAKTLGTYVPGDITLVDSYGNEFQLKNLKGKPIILSPIYTHCRAACPLITKSLL
KVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDGKGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVV
LSPELQIKDYIYGVNYNYLEFVNALRLARGETALPEGFRSYLFIIGMVGLVGTSVYIMYLLNRILQKRKKAA

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26176; Mature: 26176

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLFSFLFLITFLLAQTGSTGIPPNEAKTLGTYVPGDITLVDSYGNEFQLKNLKGKPII
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCCCEE
LSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDG
ECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCC
KGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLE
CCEEEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCEEEEHEEEECCCHHHH
FVNALRLARGETALPEGFRSYLFIIGMVGLVGTSVYIMYLLNRILQKRKKAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLLFSFLFLITFLLAQTGSTGIPPNEAKTLGTYVPGDITLVDSYGNEFQLKNLKGKPII
CHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCCCEE
LSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDPKDTLEDIKRFQKEYGIDG
ECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCC
KGWKVVKAKTSEDLFKLLDAIDFRFMTAGNDFIHPNVVVVLSPELQIKDYIYGVNYNYLE
CCEEEEEECCHHHHHHHHHHHHHEEEECCCCCCCCCEEEEECCCEEEEHEEEECCCHHHH
FVNALRLARGETALPEGFRSYLFIIGMVGLVGTSVYIMYLLNRILQKRKKAA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA