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The map label for this gene is nifX

Identifier: 16519997

GI number: 16519997

Start: 133522

End: 134004

Strand: Reverse

Name: nifX

Synonym: NGR_a01080

Alternate gene names: 16519997

Gene position: 134004-133522 (Counterclockwise)

Preceding gene: 16519996

Following gene: 16519998

Centisome position: 24.99

GC content: 58.8

Gene sequence:

>483_bases
ATGAATTCCGTTCGTCGCCTCTCGCTCGTCACTGACGAAATCCAGCCGCGGCGTTCCGGCGCATTGCGCATAGCGATCGC
GACGCAGGACATGAAAGTCCTAAACGCCCATTTCGGGTCGGCCAAGCACTTTGCAGTCTACGACGTGTCGCGCGACGGCT
GGGATTTCGTGGAAGCTGTGAGCTTCGATGACGTCTCCGACGAATCCGGGAAGCATCCGATCGAGGGCGAGGACCGCATC
ACCCCAAAGGTGACCGCGTTGACAGGCTGTCATCTCCTCTTTTGTCGGGCTATCGGCGGCCCTTCCGCAGCCAGGGTCGT
CTCTGCGAAAATTCATCCGATTAGAGTGGGAGAGCCGGAAGCCATTCAAGACGTACTTTCACGAACCCAGAAAATGCTCA
AGACGGCCCCTCCGCCGTGGTTGCGCAAGGTGCTGGCGCAAGCAGGCGTCGCAGAGAAAAAACCATTCGAGGACGAGGAC
TGA

Upstream 100 bases:

>100_bases
CGCGCGACCTGATCTTCGAGGCGGCCAACATCATCCAGGCCAACCAGCCCGCGCCGTCGCTTGAGCAAATCGATGCAATG
CGAAAGCGGAGAAATGCCGG

Downstream 100 bases:

>100_bases
ATCATGAAAAAAACGTCCATCAATACGGGCACGCCTGATGTCAAGGTGGACGAGGCGGCCCTTGTCACGCCATTTGTCAA
ATGCCTCGCGCGGCTGGTCC

Product: nitrogen fixation protein NifX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MNSVRRLSLVTDEIQPRRSGALRIAIATQDMKVLNAHFGSAKHFAVYDVSRDGWDFVEAVSFDDVSDESGKHPIEGEDRI
TPKVTALTGCHLLFCRAIGGPSAARVVSAKIHPIRVGEPEAIQDVLSRTQKMLKTAPPPWLRKVLAQAGVAEKKPFEDED

Sequences:

>Translated_160_residues
MNSVRRLSLVTDEIQPRRSGALRIAIATQDMKVLNAHFGSAKHFAVYDVSRDGWDFVEAVSFDDVSDESGKHPIEGEDRI
TPKVTALTGCHLLFCRAIGGPSAARVVSAKIHPIRVGEPEAIQDVLSRTQKMLKTAPPPWLRKVLAQAGVAEKKPFEDED
>Mature_160_residues
MNSVRRLSLVTDEIQPRRSGALRIAIATQDMKVLNAHFGSAKHFAVYDVSRDGWDFVEAVSFDDVSDESGKHPIEGEDRI
TPKVTALTGCHLLFCRAIGGPSAARVVSAKIHPIRVGEPEAIQDVLSRTQKMLKTAPPPWLRKVLAQAGVAEKKPFEDED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifX/nifY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NIFX_RHISN (P55675)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444117.1
- ProteinModelPortal:   P55675
- SMR:   P55675
- GeneID:   962484
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01080
- HOGENOM:   HBG490501
- ProtClustDB:   CLSK784576
- InterPro:   IPR003731
- InterPro:   IPR013480
- Gene3D:   G3DSA:3.30.420.130
- TIGRFAMs:   TIGR02663

Pfam domain/function: PF02579 Nitro_FeMo-Co; SSF53146 FeMo-co_biosynth

EC number: NA

Molecular weight: Translated: 17585; Mature: 17585

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVRRLSLVTDEIQPRRSGALRIAIATQDMKVLNAHFGSAKHFAVYDVSRDGWDFVEAV
CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHC
SFDDVSDESGKHPIEGEDRITPKVTALTGCHLLFCRAIGGPSAARVVSAKIHPIRVGEPE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEECCCCH
AIQDVLSRTQKMLKTAPPPWLRKVLAQAGVAEKKPFEDED
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNSVRRLSLVTDEIQPRRSGALRIAIATQDMKVLNAHFGSAKHFAVYDVSRDGWDFVEAV
CCCCHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCHHHHHC
SFDDVSDESGKHPIEGEDRITPKVTALTGCHLLFCRAIGGPSAARVVSAKIHPIRVGEPE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHEEECCCCEEECCCCH
AIQDVLSRTQKMLKTAPPPWLRKVLAQAGVAEKKPFEDED
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424