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Identifier: 16519925

GI number: 16519925

Start: 229403

End: 229810

Strand: Direct

Name: Not Available

Synonym: NGR_a01800

Alternate gene names: NA

Gene position: 229403-229810 (Clockwise)

Preceding gene: 16519926

Following gene: 16519924

Centisome position: 42.79

GC content: 62.75

Gene sequence:

>408_bases
ATGAGTCATGCGGAGAAACCTATGAGCGACAGTGTGAATCATCATCATCATCGAACATTCGAGGTCCTGACGGCGGAGCC
GGTGCGGTCTCGACGCAAGCCGCGTCATTGGTCGGACGAGGAGAAGGCGCAGCTTGTCGCCGAAGCGCTCTCGCCGGGGG
CCAATGTGTCGGCGATTGCGCGGTCTCAGGGATTGGACCCGTCGCAGCTCTATGCCTGGCGTCGTAAGGCGCTCTCGTCG
GGAATGGTCGCGCCATTGACGGAGGGAGCGCCCGCGCCAGTCAAGTTCACGCGCTTTGAAGCGGTGGGCAGTTCGATGGT
GGAAATCGTCGTGGGCGATATCGTGGTGCGCGCCGGCGCCGATGTCGATCCCGATCACCTGGCCAAGATTCTCCGGGTGG
TCCGCTAG

Upstream 100 bases:

>100_bases
GCCGGCTTAACGCGTGACTAGATAAGGCAGACATTCGATTTCTCGTAAGCGGGTAGGTCACCCCACGTATCTTTAGGGCC
GCTGAACGGTCATTCTCTGC

Downstream 100 bases:

>100_bases
GTATGATCGCTTCCGGAGTTGTGGTTTACGTGTCGTGCCAGCCGGTCGACTTCCGCAAGGGAGCCGCGTCTTTGATGGCG
CTGGTGAGGGACGGCGGCCT

Product: DNA integration/recombination/inversion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MSHAEKPMSDSVNHHHHRTFEVLTAEPVRSRRKPRHWSDEEKAQLVAEALSPGANVSAIARSQGLDPSQLYAWRRKALSS
GMVAPLTEGAPAPVKFTRFEAVGSSMVEIVVGDIVVRAGADVDPDHLAKILRVVR

Sequences:

>Translated_135_residues
MSHAEKPMSDSVNHHHHRTFEVLTAEPVRSRRKPRHWSDEEKAQLVAEALSPGANVSAIARSQGLDPSQLYAWRRKALSS
GMVAPLTEGAPAPVKFTRFEAVGSSMVEIVVGDIVVRAGADVDPDHLAKILRVVR
>Mature_134_residues
SHAEKPMSDSVNHHHHRTFEVLTAEPVRSRRKPRHWSDEEKAQLVAEALSPGANVSAIARSQGLDPSQLYAWRRKALSSG
MVAPLTEGAPAPVKFTRFEAVGSSMVEIVVGDIVVRAGADVDPDHLAKILRVVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 8 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4RG_RHISN (P55640)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444045.1
- ProteinModelPortal:   P55640
- GeneID:   962417
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01800
- HOGENOM:   HBG756815
- ProtClustDB:   CLSK886516
- InterPro:   IPR009057
- InterPro:   IPR002514

Pfam domain/function: PF01527 Transposase_8; SSF46689 Homeodomain_like

EC number: NA

Molecular weight: Translated: 14779; Mature: 14648

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHAEKPMSDSVNHHHHRTFEVLTAEPVRSRRKPRHWSDEEKAQLVAEALSPGANVSAIA
CCCCCCCCCCCCCCCCCHHHHEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
RSQGLDPSQLYAWRRKALSSGMVAPLTEGAPAPVKFTRFEAVGSSMVEIVVGDIVVRAGA
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC
DVDPDHLAKILRVVR
CCCHHHHHHHHHHHC
>Mature Secondary Structure 
SHAEKPMSDSVNHHHHRTFEVLTAEPVRSRRKPRHWSDEEKAQLVAEALSPGANVSAIA
CCCCCCCCCCCCCCCCHHHHEEECCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHH
RSQGLDPSQLYAWRRKALSSGMVAPLTEGAPAPVKFTRFEAVGSSMVEIVVGDIVVRAGA
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC
DVDPDHLAKILRVVR
CCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424