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Identifier: 16519912

GI number: 16519912

Start: 247811

End: 248983

Strand: Reverse

Name: Not Available

Synonym: NGR_a01930

Alternate gene names: NA

Gene position: 248983-247811 (Counterclockwise)

Preceding gene: 16519908

Following gene: 16519919

Centisome position: 46.44

GC content: 60.7

Gene sequence:

>1173_bases
ATGTCCTTCTTCGGGAGTGAGGTGGCTCGCCCTAGACTGTTCTTCCGAGGGTTGCTCGGACAGGCCGGGCCGATCCTCAT
AACAGGAGGACGAGCCGTGGCTGATTATAGAGAAGCTTTTGTCGGAATCGATGTTGCAAAATTAAAGAACGCGATTGCGG
TCGCCGAATCCGGTCGAAACGGCGAGGTACGATACTGGGGCGAGGTCGAGGCGTCTGATGCAGGGATACGTCGCGCGATC
AAGCAGATCACGGCGAAGTTTGAACACGTGTATTTCTGTTACGAGGCGGGGCCCACTGGCTACGGGCTCTACCGGCTGAT
CCGCTCACTCGGCCACGAATGCATCGTTGTGGCTCCATCTTTGATCCCGAGAAAACCAGGCGACCGGGTAAAGACGAACC
GCCGCGATGCCATTTCGCTCGCCCGGCTATTGCGGGCCGGCGAGCTCACGGCGGTGTGGGTTCCCGATGAAGATCATGAG
GCCATGCGCGACCTTGTCCGGGCTCGCACGAGTGCCGTCGAGACGCTGCGCACCCATCGCCAGCAGGTCAACGCGTTCAT
GCTCAAGCACGGTCGTATCTATCCCGGCAAGAGGAGCTGGACGATGCGCTACCTTCGATGGCTGCAAGAACAGCACTTCG
ACCATCCTGCCCATCAGATCGCGCTGCAGGAGATGGTCGAAACGGTCATCGCCGAATTCGTGCCCCACTGGTCACTCGCT
GCGGTCGTATGCGCTCTGCGGGCCTTGCGCGGCGTGGACTTGATCGCCGCGGTGACGTTTGCGACAGAAGTGGGAGATGC
CGGCCGCTTTGAGAGCCCCCGCCAACTGATGGGGTATCTCGGTCTTGTTCCCGGCGAACGATCGACCGGGGAGACAACAA
AGAGGATCGGCATTACCAAGGCAGGCAACAGCCGAGTCCGGACTTTGCTGGTTGAATGCGCGTGGACGTATCGGTATCCG
CCTCGGATCGGCAAGAGGAAGCTGTATCGCCTCGAAGAGGTATCATCGTCGGTTCGCGAGATCGCCTGGAAGGCGCAGAC
CCGCCTGACGGCCCGCTACCGCATGCTGAGCGCCCGAGGGAAAAAGTCGACGGTCGTGTGCACCGCAGTCGCACGGGAAC
TCGCCGGCTTCATGTGGGCAATTGCAAGGGAGGCGCGACAGACCACGTCATAA

Upstream 100 bases:

>100_bases
ACCAGGGCAAATAGTATTGGTGCGACTTCGAAGTCGGACTGTAGGTGAAGTGCGCAAAAGAGTTGAGGTGTATTGATGGG
TCAATGTTCCGTAAGACCGT

Downstream 100 bases:

>100_bases
CAGCCGCGCACCGACTCGCGCATTGGCGGAGGCGGGACAACGGCAGGGGAATGTCCGTTAACCGCTTTGTGGCCGGCAAG
TCCGACGCCCGCAGTAAGAC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSFFGSEVARPRLFFRGLLGQAGPILITGGRAVADYREAFVGIDVAKLKNAIAVAESGRNGEVRYWGEVEASDAGIRRAI
KQITAKFEHVYFCYEAGPTGYGLYRLIRSLGHECIVVAPSLIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHE
AMRDLVRARTSAVETLRTHRQQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDHPAHQIALQEMVETVIAEFVPHWSLA
AVVCALRALRGVDLIAAVTFATEVGDAGRFESPRQLMGYLGLVPGERSTGETTKRIGITKAGNSRVRTLLVECAWTYRYP
PRIGKRKLYRLEEVSSSVREIAWKAQTRLTARYRMLSARGKKSTVVCTAVARELAGFMWAIAREARQTTS

Sequences:

>Translated_390_residues
MSFFGSEVARPRLFFRGLLGQAGPILITGGRAVADYREAFVGIDVAKLKNAIAVAESGRNGEVRYWGEVEASDAGIRRAI
KQITAKFEHVYFCYEAGPTGYGLYRLIRSLGHECIVVAPSLIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHE
AMRDLVRARTSAVETLRTHRQQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDHPAHQIALQEMVETVIAEFVPHWSLA
AVVCALRALRGVDLIAAVTFATEVGDAGRFESPRQLMGYLGLVPGERSTGETTKRIGITKAGNSRVRTLLVECAWTYRYP
PRIGKRKLYRLEEVSSSVREIAWKAQTRLTARYRMLSARGKKSTVVCTAVARELAGFMWAIAREARQTTS
>Mature_389_residues
SFFGSEVARPRLFFRGLLGQAGPILITGGRAVADYREAFVGIDVAKLKNAIAVAESGRNGEVRYWGEVEASDAGIRRAIK
QITAKFEHVYFCYEAGPTGYGLYRLIRSLGHECIVVAPSLIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHEA
MRDLVRARTSAVETLRTHRQQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDHPAHQIALQEMVETVIAEFVPHWSLAA
VVCALRALRGVDLIAAVTFATEVGDAGRFESPRQLMGYLGLVPGERSTGETTKRIGITKAGNSRVRTLLVECAWTYRYPP
RIGKRKLYRLEEVSSSVREIAWKAQTRLTARYRMLSARGKKSTVVCTAVARELAGFMWAIAREARQTTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase IS1111A/IS1328/IS1533 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4QE_RHISN (P55626)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_444032.1
- GeneID:   962406
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a01930
- HOGENOM:   HBG703290
- ProtClustDB:   CLSK893867
- InterPro:   IPR003346
- InterPro:   IPR002525

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9

EC number: NA

Molecular weight: Translated: 43830; Mature: 43699

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFGSEVARPRLFFRGLLGQAGPILITGGRAVADYREAFVGIDVAKLKNAIAVAESGRN
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GEVRYWGEVEASDAGIRRAIKQITAKFEHVYFCYEAGPTGYGLYRLIRSLGHECIVVAPS
CCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCEEEECCH
LIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHEAMRDLVRARTSAVETLRTHR
HCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
QQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDHPAHQIALQEMVETVIAEFVPHWSLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
AVVCALRALRGVDLIAAVTFATEVGDAGRFESPRQLMGYLGLVPGERSTGETTKRIGITK
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCEEC
AGNSRVRTLLVECAWTYRYPPRIGKRKLYRLEEVSSSVREIAWKAQTRLTARYRMLSARG
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKSTVVCTAVARELAGFMWAIAREARQTTS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SFFGSEVARPRLFFRGLLGQAGPILITGGRAVADYREAFVGIDVAKLKNAIAVAESGRN
CCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
GEVRYWGEVEASDAGIRRAIKQITAKFEHVYFCYEAGPTGYGLYRLIRSLGHECIVVAPS
CCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHCCCCEEEECCH
LIPRKPGDRVKTNRRDAISLARLLRAGELTAVWVPDEDHEAMRDLVRARTSAVETLRTHR
HCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
QQVNAFMLKHGRIYPGKRSWTMRYLRWLQEQHFDHPAHQIALQEMVETVIAEFVPHWSLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHH
AVVCALRALRGVDLIAAVTFATEVGDAGRFESPRQLMGYLGLVPGERSTGETTKRIGITK
HHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHCCEEC
AGNSRVRTLLVECAWTYRYPPRIGKRKLYRLEEVSSSVREIAWKAQTRLTARYRMLSARG
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KKSTVVCTAVARELAGFMWAIAREARQTTS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424