Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 16519879

GI number: 16519879

Start: 295440

End: 296132

Strand: Reverse

Name: Not Available

Synonym: NGR_a02260

Alternate gene names: NA

Gene position: 296132-295440 (Counterclockwise)

Preceding gene: 16519878

Following gene: 16519885

Centisome position: 55.23

GC content: 57.43

Gene sequence:

>693_bases
ATGGATGAGGTCGCCATCAAGGACGAGTTTTATCGGCTAATTCCGTCACGGTTCCCGCCAGTCGCGGTGTACGAGGGATT
GGTCAGCGAGGACAAGATCGAGGCACTTGTCGAAATAGAGAACAAGACGAATCCGCGTCTCCAGTCGGAGGGCCGGCTGC
TATCCGCTCATACCGATCCGAGGGCGCCGAGGCTGCAGAACTGGAACCTGGCTCCCTTCAAGTACCTGAACCCGGAGGGA
ATCCGCTTTTTCGACGGTAGTCGCCCGGCACTGGAATTGGCAGACGATCGTCAGACCGCGCTCGCTATGTCTGTCGAGCG
TCGTCAGGCCTTCTTGTCGCGAACCAAGGAAGCGCCAATCGGCCTCGATATGCGATTGCTCAAGACACCGGTGAGCGGGC
GGTTCATCGATTTTCGAAAGTATCCGATCGATCTATCGTGCGAGGAACGCTGGAGATTGGGAGGTTCGGTGCCCGAAGGC
GCGGACGGCGTGATTTATCATCCGCCGGAGCGGCCCTCAGCCATTTGCATTGCGGTACTCCGAGGCGACGTTCTTGGCCG
AACGATTCAGACGGTCCATTACCGCTACGTTTGGAATGGTACCCGAATATCCCTCCTTTATGCCTTTGATGATGCAGGCA
ACGAAATTCGCCCAGAGGTATTGGGTGGCGCGGATGATGCATTCGCCGTGTGA

Upstream 100 bases:

>100_bases
CTTCGATGGAGCAAGTGCACTCGACACCATGCTGCAGGGGAGGGTTGTCGATATCTACAGAGTGCGCCAGTACCTCGATG
CTCAGCGTGGCGGGTGACAA

Downstream 100 bases:

>100_bases
GCATTAAATCTAGCAAAACACACCTACATTCCGCTTAAAATCGATTTCGCCTTCTGCTTATTCACAGTGATATTCTCAGC
AGGCAACTCTACCCTTCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MDEVAIKDEFYRLIPSRFPPVAVYEGLVSEDKIEALVEIENKTNPRLQSEGRLLSAHTDPRAPRLQNWNLAPFKYLNPEG
IRFFDGSRPALELADDRQTALAMSVERRQAFLSRTKEAPIGLDMRLLKTPVSGRFIDFRKYPIDLSCEERWRLGGSVPEG
ADGVIYHPPERPSAICIAVLRGDVLGRTIQTVHYRYVWNGTRISLLYAFDDAGNEIRPEVLGGADDAFAV

Sequences:

>Translated_230_residues
MDEVAIKDEFYRLIPSRFPPVAVYEGLVSEDKIEALVEIENKTNPRLQSEGRLLSAHTDPRAPRLQNWNLAPFKYLNPEG
IRFFDGSRPALELADDRQTALAMSVERRQAFLSRTKEAPIGLDMRLLKTPVSGRFIDFRKYPIDLSCEERWRLGGSVPEG
ADGVIYHPPERPSAICIAVLRGDVLGRTIQTVHYRYVWNGTRISLLYAFDDAGNEIRPEVLGGADDAFAV
>Mature_230_residues
MDEVAIKDEFYRLIPSRFPPVAVYEGLVSEDKIEALVEIENKTNPRLQSEGRLLSAHTDPRAPRLQNWNLAPFKYLNPEG
IRFFDGSRPALELADDRQTALAMSVERRQAFLSRTKEAPIGLDMRLLKTPVSGRFIDFRKYPIDLSCEERWRLGGSVPEG
ADGVIYHPPERPSAICIAVLRGDVLGRTIQTVHYRYVWNGTRISLLYAFDDAGNEIRPEVLGGADDAFAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4OC_RHISN (P55588)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443999.1
- GeneID:   962381
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02260
- HOGENOM:   HBG655911
- ProtClustDB:   CLSK516119

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25973; Mature: 25973

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEVAIKDEFYRLIPSRFPPVAVYEGLVSEDKIEALVEIENKTNPRLQSEGRLLSAHTDP
CCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCEEEECCCC
RAPRLQNWNLAPFKYLNPEGIRFFDGSRPALELADDRQTALAMSVERRQAFLSRTKEAPI
CCCCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
GLDMRLLKTPVSGRFIDFRKYPIDLSCEERWRLGGSVPEGADGVIYHPPERPSAICIAVL
CCCHHEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEE
RGDVLGRTIQTVHYRYVWNGTRISLLYAFDDAGNEIRPEVLGGADDAFAV
CCHHHHCEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MDEVAIKDEFYRLIPSRFPPVAVYEGLVSEDKIEALVEIENKTNPRLQSEGRLLSAHTDP
CCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCHHEEEEEECCCCCCCCCCCCCEEEECCCC
RAPRLQNWNLAPFKYLNPEGIRFFDGSRPALELADDRQTALAMSVERRQAFLSRTKEAPI
CCCCCCCCCCCCEEEECCCCEEEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
GLDMRLLKTPVSGRFIDFRKYPIDLSCEERWRLGGSVPEGADGVIYHPPERPSAICIAVL
CCCHHEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCEECCCCCCCCEEEEEE
RGDVLGRTIQTVHYRYVWNGTRISLLYAFDDAGNEIRPEVLGGADDAFAV
CCHHHHCEEEEEEEEEEECCCEEEEEEEEECCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424