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Identifier: 16519846

GI number: 16519846

Start: 341139

End: 341690

Strand: Reverse

Name: Not Available

Synonym: NGR_a02590

Alternate gene names: 16519846

Gene position: 341690-341139 (Counterclockwise)

Preceding gene: 16519845

Following gene: 16519847

Centisome position: 63.73

GC content: 61.23

Gene sequence:

>552_bases
ATGGCTCGTATCGGATATGCCCGGACATTTACAACAGACCAGAACCTTGCGGCGCAAATCGCCGCGCTCAGGAACGCCGG
CTGCGAGGTCATCCGCGAGGAGCAGAAAAGCGGTGCATCGCTCGAAGGTCGGCCGCAACTGATGACCATTCTCGACTTCA
TCCATGCCGGCGAAACCTTTGTCATCACCCGTATCGACCGGCTGGCCAGATCTCTGCGCGATCTTCAGGTGATCGTCGAC
CGGCTCAAGGCCAAGGGCGCGCATCTGGTTGCCACTGAGCAACCCGCCGATACCTCCACAGCCGCCGGGAAGGCGTTCTT
CGACATGCTCGGCGTCTTCGCGGGGTTCGAAACCAACCTGCGGCGCGAGCGGCAGGCTGAGGGTATTGCCGCTGCCAGGA
AACGTGGCATCTACAAAGGCCGCCCCCCGAAGATTGACCGCGCAGAAATCCTGCTTCGGCTGCAACAGGGCCAAGGCCCC
AGCAAGATCGCTCGCGATCTCGGCATATCGCGCGGCACGGTCTATCAGGTGCGCAAAGGTGTTTTCGAATGA

Upstream 100 bases:

>100_bases
TCGAGGCTGTGGATTCCTATTTATTTTGGGTCCCGACTGAGATATCGAACAAATCGACGCGATGGCACACGCAAATTGAA
CAGTTTGCATGGTATAGGAC

Downstream 100 bases:

>100_bases
GCAAGGCCATCCGCATCGCCCGTTTGACATCCGCCACCTGCGAGCAAATCCAGGCCCGCATGCTTGAGGCTTGCAGGCAG
ATCGCTTCAGATCACGGCCT

Product: integrase/recombinase of undefined transposable element

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MARIGYARTFTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETFVITRIDRLARSLRDLQVIVD
RLKAKGAHLVATEQPADTSTAAGKAFFDMLGVFAGFETNLRRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQQGQGP
SKIARDLGISRGTVYQVRKGVFE

Sequences:

>Translated_183_residues
MARIGYARTFTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETFVITRIDRLARSLRDLQVIVD
RLKAKGAHLVATEQPADTSTAAGKAFFDMLGVFAGFETNLRRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQQGQGP
SKIARDLGISRGTVYQVRKGVFE
>Mature_182_residues
ARIGYARTFTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETFVITRIDRLARSLRDLQVIVDR
LKAKGAHLVATEQPADTSTAAGKAFFDMLGVFAGFETNLRRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQQGQGPS
KIARDLGISRGTVYQVRKGVFE

Specific function: This Protein Catalyzes The Inversion Of An 1800-Bp E.Coli DNA Fragment, The P Region, Which Can Exist In Either Orientation. The Function Of The Inversion Is Not Yet Clear. [C]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family

Homologues:

Organism=Escherichia coli, GI1787404, Length=142, Percent_Identity=42.2535211267606, Blast_Score=106, Evalue=8e-25,
Organism=Escherichia coli, GI1787638, Length=189, Percent_Identity=30.6878306878307, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1787827, Length=189, Percent_Identity=30.1587301587302, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4LS_RHISN (P55559)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443966.1
- ProteinModelPortal:   P55559
- SMR:   P55559
- GeneID:   962608
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02590
- HOGENOM:   HBG739917
- ProtClustDB:   CLSK506567
- GO:   GO:0032196
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120
- Gene3D:   G3DSA:1.10.10.60
- Gene3D:   G3DSA:3.40.50.1390
- SMART:   SM00857

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase; SSF46689 Homeodomain_like; SSF53041 Resolv_N

EC number: NA

Molecular weight: Translated: 20181; Mature: 20049

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: PS00397 RECOMBINASES_1; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIGYARTFTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETF
CCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
VITRIDRLARSLRDLQVIVDRLKAKGAHLVATEQPADTSTAAGKAFFDMLGVFAGFETNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHH
RRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQQGQGPSKIARDLGISRGTVYQVRKG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH
VFE
CCC
>Mature Secondary Structure 
ARIGYARTFTTDQNLAAQIAALRNAGCEVIREEQKSGASLEGRPQLMTILDFIHAGETF
CCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCH
VITRIDRLARSLRDLQVIVDRLKAKGAHLVATEQPADTSTAAGKAFFDMLGVFAGFETNL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHH
RRERQAEGIAAARKRGIYKGRPPKIDRAEILLRLQQGQGPSKIARDLGISRGTVYQVRKG
HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHH
VFE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424