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Identifier: 16519836

GI number: 16519836

Start: 354618

End: 355589

Strand: Reverse

Name: Not Available

Synonym: NGR_a02690

Alternate gene names: NA

Gene position: 355589-354618 (Counterclockwise)

Preceding gene: 16519825

Following gene: 16519837

Centisome position: 66.32

GC content: 59.67

Gene sequence:

>972_bases
ATGCCGAGCGTCTTTTTTTCATATTCGCACGCAGATGAGGGGCTGAGGGATCAGCTCGAAAAACAGCTGTCGATGCTCAA
ACGACAGGGCGTGATTGAGACCTGGCACGACCGGCGCATCGGCGCCGGCGAAGATATCCATCGTGCGATTGACGATCACA
TCAATACGGACGACATCATCCTGCTGCTCGTCAGCGCCGACTTCATCGCATCGGATTACTGTTACGACATCGAAATGCAG
CGTGCGATGGAGCGCCACCACAGCGGCGAAGCCATCGTCATTCCCATCATTCTTCGGGCATGCGACTGGCACCACGCGCC
GTTTGGAAAGCTGAATGCGGTTCCTCGGGACGGCAAACCGATCACGCAATGGCCGGATATCGACGAGGCCTTTCTGCAAG
TCGCCAAGGCCGTGCGCGAAGCAGCAGGGCGGGTAACCCGAACGGCCTCGGCTCCGCCTGCACGGGCCGCTGCGGCTGCG
ACGCCTGCGGCGTCGCCGGCTCCTCAATCCCTCGGCCCGCGGTCGAGCAATCTGCGGCTCGCGAAGAGCTTCACCCAAAG
GGACAAGGACCAGTTCAGACACGACACGTTCGAATACATTGCGCGTTTCTTCGAGAACTCCCTTAAGGAGCTTGGCGAGC
GAAACGCCGGTTTCGAGGGCGTTTTCCGACGGGTCGACGCGAACAGGTTCTTCGCCACCATCTACCGCGACGGCAAGGAT
GTGTCACGGGGCACCGCCTATCTGGGTGGGGAGACGTGGGGACGAGGCATCAATTACGTTCACGGTGAGACGACCAGCAG
CAATAGCTCGAATGAGTCCCTGAACGTCGAGGCCGACGATCAGACGCTCTTCTTGACAAGTATGGGCATGGCGTCGTTTG
GGCGGGATCGCGATCAGAAACTTTCACAAGAAGGGGCCGCCGAACTGCTATGGGCGATCCTTATCGCCCCTCTTCAGGGG
ACGCGCTATTAA

Upstream 100 bases:

>100_bases
GGCGTTGAAGCGACCGAACGGGGAGCGGGAAAAACACAAACAGACATCTTGTCACGCAGATGCGAAGCGTCCCATAGTTC
GCGCAGCAAAAGGGGGAGAC

Downstream 100 bases:

>100_bases
GGGAAAGCATATGCTGTCACCGAGTGAATTCACGATCGGCACGCTGGGGAGCGCCGCGCCTCTCAGCCTTATTCTGCCAC
GAACGAAATACGAGGCGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPSVFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILLLVSADFIASDYCYDIEMQ
RAMERHHSGEAIVIPIILRACDWHHAPFGKLNAVPRDGKPITQWPDIDEAFLQVAKAVREAAGRVTRTASAPPARAAAAA
TPAASPAPQSLGPRSSNLRLAKSFTQRDKDQFRHDTFEYIARFFENSLKELGERNAGFEGVFRRVDANRFFATIYRDGKD
VSRGTAYLGGETWGRGINYVHGETTSSNSSNESLNVEADDQTLFLTSMGMASFGRDRDQKLSQEGAAELLWAILIAPLQG
TRY

Sequences:

>Translated_323_residues
MPSVFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILLLVSADFIASDYCYDIEMQ
RAMERHHSGEAIVIPIILRACDWHHAPFGKLNAVPRDGKPITQWPDIDEAFLQVAKAVREAAGRVTRTASAPPARAAAAA
TPAASPAPQSLGPRSSNLRLAKSFTQRDKDQFRHDTFEYIARFFENSLKELGERNAGFEGVFRRVDANRFFATIYRDGKD
VSRGTAYLGGETWGRGINYVHGETTSSNSSNESLNVEADDQTLFLTSMGMASFGRDRDQKLSQEGAAELLWAILIAPLQG
TRY
>Mature_322_residues
PSVFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDIILLLVSADFIASDYCYDIEMQR
AMERHHSGEAIVIPIILRACDWHHAPFGKLNAVPRDGKPITQWPDIDEAFLQVAKAVREAAGRVTRTASAPPARAAAAAT
PAASPAPQSLGPRSSNLRLAKSFTQRDKDQFRHDTFEYIARFFENSLKELGERNAGFEGVFRRVDANRFFATIYRDGKDV
SRGTAYLGGETWGRGINYVHGETTSSNSSNESLNVEADDQTLFLTSMGMASFGRDRDQKLSQEGAAELLWAILIAPLQGT
RY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4LF_RHISN (P55546)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443956.1
- ProteinModelPortal:   P55546
- SMR:   P55546
- GeneID:   962241
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a02690
- HOGENOM:   HBG487396
- ProtClustDB:   CLSK809008
- InterPro:   IPR000157
- SMART:   SM00255

Pfam domain/function: PF01582 TIR; SSF52200 TIR

EC number: NA

Molecular weight: Translated: 36060; Mature: 35928

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDII
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
LLLVSADFIASDYCYDIEMQRAMERHHSGEAIVIPIILRACDWHHAPFGKLNAVPRDGKP
EEEEEHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC
ITQWPDIDEAFLQVAKAVREAAGRVTRTASAPPARAAAAATPAASPAPQSLGPRSSNLRL
CCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHH
AKSFTQRDKDQFRHDTFEYIARFFENSLKELGERNAGFEGVFRRVDANRFFATIYRDGKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEEECCCCC
VSRGTAYLGGETWGRGINYVHGETTSSNSSNESLNVEADDQTLFLTSMGMASFGRDRDQK
CCCCCEEECCCHHCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEHHCHHHHCCCHHHH
LSQEGAAELLWAILIAPLQGTRY
HHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PSVFFSYSHADEGLRDQLEKQLSMLKRQGVIETWHDRRIGAGEDIHRAIDDHINTDDII
CCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
LLLVSADFIASDYCYDIEMQRAMERHHSGEAIVIPIILRACDWHHAPFGKLNAVPRDGKP
EEEEEHHHHHCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCC
ITQWPDIDEAFLQVAKAVREAAGRVTRTASAPPARAAAAATPAASPAPQSLGPRSSNLRL
CCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHHH
AKSFTQRDKDQFRHDTFEYIARFFENSLKELGERNAGFEGVFRRVDANRFFATIYRDGKD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHEEEEEECCCCC
VSRGTAYLGGETWGRGINYVHGETTSSNSSNESLNVEADDQTLFLTSMGMASFGRDRDQK
CCCCCEEECCCHHCCCCCEECCCCCCCCCCCCEEEEECCCCEEEEEHHCHHHHCCCHHHH
LSQEGAAELLWAILIAPLQGTRY
HHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424