| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519811
GI number: 16519811
Start: 382212
End: 383180
Strand: Direct
Name: Not Available
Synonym: NGR_a02940
Alternate gene names: NA
Gene position: 382212-383180 (Clockwise)
Preceding gene: 16519813
Following gene: 16519810
Centisome position: 71.29
GC content: 51.19
Gene sequence:
>969_bases ATGAGGCATGCGATCGCGTTGACAGCAGCAGCGGCTTTGTTGCCGAACTGCGCTATCAGGCCACTTCCGGAAGATGTCAC CCGATTGAATACTTATGCGATCGTCACCAGAATTCGGTGCGAAGCGCGAGATGCCGTCCTGTCCGAACTGCTTGAGTACT TAAAAAACAGTCGCAGCAACGTATCTCCGGAAATTGTCACCCAGATAGAGGAAGACCCAAACACAATCGCGAACTTCGAT CGCAGCCGACTTCCAAATGCAACACGAAAGAAGATCGATCTCTACGCAAATGCTGCGATTGTCTATGACTTCGAGTTCGA TATGTCGCAGCACAGCAGAAACAGTCTTGGCGCTACTCTGAACGATACCTGGAGCAGTGGAATATTCAACTTGGGTGTTT CCGGTGCCCACGAGCGAACGCGCCGAAATCAGCGGCGTTTTAGAGTCGAGGATAATTTCTACAAGCTATTCACGGATCCC CCGAGGTGCGAGCCCTATTCCGAGAACGGAAAGTTCAAGCGCGAAAAAAATTACGCCTATCCCATAACCGGATACATCGG GCTTCAAGAAATAATCGATACGTTTTGGCGCCTGAATGAAGACCATATTCTTGGCAGCACTGATAGTGGACAGCCAAAGG TCAACAAACTTGCCGATGAGATTCAGTTCACGACTAAAAACAGCTTCTCGGCCACTCCCAGTGCCGAACTGGATCCCGCT AACCATTTGAAGATCGTGGCTGTTGACGCAGAGTCATCCCATTGGAGACAAGACATACACACCGTCACCATTGGCGTCGC CGTGCAGGACGAGGAGGAAGAGCCTCGCGACGAACGCAGACCAAGGCGACGTCTGGGCAAGGCGCAAAGCGCGATCAAGA ACGCGAACGATGCAATCAATGAGCTGCAACTGCGCAATATCCAGATACTCAACAGAAGCGACCTGCAACAACTACTCCCA AACTTGTGA
Upstream 100 bases:
>100_bases GACAATTTAGAGGGGACTAATGAGGGAATTATGCGGCAAAAGCTAGCGCCGCCGATTCTCAGCGTTGACCAATTCAGCGG GTCTTTGTCGGGGGGCACTG
Downstream 100 bases:
>100_bases AACATCGGCCTGACAGGAGGGTAATTCTCATGGGAAGCGCTTGGCCGGCAGAGATCCGAAAAATCGCGAAAATTTCTAAG CGATTGTTGGGGGCCACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MRHAIALTAAAALLPNCAIRPLPEDVTRLNTYAIVTRIRCEARDAVLSELLEYLKNSRSNVSPEIVTQIEEDPNTIANFD RSRLPNATRKKIDLYANAAIVYDFEFDMSQHSRNSLGATLNDTWSSGIFNLGVSGAHERTRRNQRRFRVEDNFYKLFTDP PRCEPYSENGKFKREKNYAYPITGYIGLQEIIDTFWRLNEDHILGSTDSGQPKVNKLADEIQFTTKNSFSATPSAELDPA NHLKIVAVDAESSHWRQDIHTVTIGVAVQDEEEEPRDERRPRRRLGKAQSAIKNANDAINELQLRNIQILNRSDLQQLLP NL
Sequences:
>Translated_322_residues MRHAIALTAAAALLPNCAIRPLPEDVTRLNTYAIVTRIRCEARDAVLSELLEYLKNSRSNVSPEIVTQIEEDPNTIANFD RSRLPNATRKKIDLYANAAIVYDFEFDMSQHSRNSLGATLNDTWSSGIFNLGVSGAHERTRRNQRRFRVEDNFYKLFTDP PRCEPYSENGKFKREKNYAYPITGYIGLQEIIDTFWRLNEDHILGSTDSGQPKVNKLADEIQFTTKNSFSATPSAELDPA NHLKIVAVDAESSHWRQDIHTVTIGVAVQDEEEEPRDERRPRRRLGKAQSAIKNANDAINELQLRNIQILNRSDLQQLLP NL >Mature_322_residues MRHAIALTAAAALLPNCAIRPLPEDVTRLNTYAIVTRIRCEARDAVLSELLEYLKNSRSNVSPEIVTQIEEDPNTIANFD RSRLPNATRKKIDLYANAAIVYDFEFDMSQHSRNSLGATLNDTWSSGIFNLGVSGAHERTRRNQRRFRVEDNFYKLFTDP PRCEPYSENGKFKREKNYAYPITGYIGLQEIIDTFWRLNEDHILGSTDSGQPKVNKLADEIQFTTKNSFSATPSAELDPA NHLKIVAVDAESSHWRQDIHTVTIGVAVQDEEEEPRDERRPRRRLGKAQSAIKNANDAINELQLRNIQILNRSDLQQLLP NL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4KA_RHISN (P55521)
Other databases:
- EMBL: U00090 - RefSeq: NP_443931.1 - GeneID: 962343 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a02940 - ProtClustDB: CLSK563535
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36690; Mature: 36690
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHAIALTAAAALLPNCAIRPLPEDVTRLNTYAIVTRIRCEARDAVLSELLEYLKNSRSN CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSPEIVTQIEEDPNTIANFDRSRLPNATRKKIDLYANAAIVYDFEFDMSQHSRNSLGATL CCHHHHHHHHCCCHHHHHCHHHHCCCHHHHHEEEEECEEEEEEEECCCHHHCHHHCCCCC NDTWSSGIFNLGVSGAHERTRRNQRRFRVEDNFYKLFTDPPRCEPYSENGKFKREKNYAY CCCCCCCCEECCCCCHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCCEEECCCCCC PITGYIGLQEIIDTFWRLNEDHILGSTDSGQPKVNKLADEIQFTTKNSFSATPSAELDPA CEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCC NHLKIVAVDAESSHWRQDIHTVTIGVAVQDEEEEPRDERRPRRRLGKAQSAIKNANDAIN CCEEEEEEECCCHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELQLRNIQILNRSDLQQLLPNL HHHHHHEEEECHHHHHHHCCCC >Mature Secondary Structure MRHAIALTAAAALLPNCAIRPLPEDVTRLNTYAIVTRIRCEARDAVLSELLEYLKNSRSN CCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC VSPEIVTQIEEDPNTIANFDRSRLPNATRKKIDLYANAAIVYDFEFDMSQHSRNSLGATL CCHHHHHHHHCCCHHHHHCHHHHCCCHHHHHEEEEECEEEEEEEECCCHHHCHHHCCCCC NDTWSSGIFNLGVSGAHERTRRNQRRFRVEDNFYKLFTDPPRCEPYSENGKFKREKNYAY CCCCCCCCEECCCCCHHHHHHHHHHCEEECCCEEEEECCCCCCCCCCCCCCEEECCCCCC PITGYIGLQEIIDTFWRLNEDHILGSTDSGQPKVNKLADEIQFTTKNSFSATPSAELDPA CEEHHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCCC NHLKIVAVDAESSHWRQDIHTVTIGVAVQDEEEEPRDERRPRRRLGKAQSAIKNANDAIN CCEEEEEEECCCHHHHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ELQLRNIQILNRSDLQQLLPNL HHHHHHEEEECHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424