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Identifier: 16519642

GI number: 16519642

Start: 55156

End: 56409

Strand: Direct

Name: Not Available

Synonym: NGR_a00450

Alternate gene names: NA

Gene position: 55156-56409 (Clockwise)

Preceding gene: 16519643

Following gene: 16519641

Centisome position: 10.29

GC content: 63.96

Gene sequence:

>1254_bases
ATGCCAAAAAATGTTCACATTATCGGCGCCGGGATCTCCGGCCTTTCCGCGGCCGTGCAGTTGAGCAATGCAGGTTTGCC
GGTGCATGTCTATGAAGCGACGCAACAGGCCGGCGGTCGATGCCGCTCCTTTTTCGATTCCGCAACCAATCTCACCATCG
ACAACGGCAACCATCTGGTTCTATCGGGCAACCAATATGTGCGCAACTACGCCCGTGCGATCGGAACGGAATCCGGTCTT
GTCGGTCCGACGAGTGCCAAGTTTCCCTTCGTCGACATCTCCACCGTACAGCGCTGGCAGGTCGATCTCGGCGGCGGCAG
GCTTCCGACCTGGGTGTTCCACAAGGCGCGTCGCGTCCCCGACACCAGGCTGTGGGACTACCTGAAGCTCGCGCCAATCC
TATGGGCCGGCGCGGATGAACTGGTCGGAAACACTATACCCTGCAATGGTACGCTGTACCGGCGTCTGGTGCGGCCGCTG
CTGCTCGCCGCCCTGAATTGCGATCCGCCGGAGGGCTCGGCAGGGCTTGCCGGTGCCATCGTACGGGAAACGCTGCTCGC
GGGCGGCGAGGCTTGCCGTCCGCTAGTCGCGCGCGACGGACTGAGCGCCGTTCTGGTCGAGCCGGCGGTCAAGCTCCTGG
AGAGGCGGGGCGCCACCGTCCGCCTCAGCCATAAACTGCGCAAGCTTGCCAAATCGGCCGAGATCATCAGCGAACTTGAT
TTCGGTGACGACAAGATAGCGGTCGGCCCCGACGACGCCGTGATCCTCGCCGTGCCGCCACGGGCGGCCGCGACGCTCCT
GCCCGGCCTGAAAACCCCGACCGAATTCCGCGCCGTCGTTAATGCCCATTTTCGCTTCGATCCGCCAGTCGGTGCGGATC
CGATCCTGGGCGTGGTCGGCGGGCTCGTGGAGTGGCTGTTCGCCTATCCGCAGCGGCTTTCAGTCACCATTAGCAATGGC
GACCGCCTGCTTGACATTCCGCGTGAGGAGGTCGTGCGAGTGATCTGGCGCGACGTGTGCGAGGCCGGTGGGATCTCAGG
CGAGCTGCCGCCGTGGCAGATCGTGTGTGAGCGCCGGGCCACATTCCAGGCCACCCCGGAGCAGAACGCGCTACGTCCAG
GGCCCGTGACCGGTTGCAAAAACCTGTTCCTTGCTGGCGACTGGACCGCAACCGGTTTGCCGGCAACCATCGAGGGATCG
GTGCGGTCGGGTAACCGTGCCGCCGATCTGGCTCTTTCAGAGACAAACACTTGA

Upstream 100 bases:

>100_bases
ACCTGCTGCTGATAAGGGGTTTTGCGGCTCCCCGGGAACCGGTGCGTGTAACCAATCTCACAAAGCGCGCCATTCTCTTC
CGTTACGCCTTGATGTTGTG

Downstream 100 bases:

>100_bases
TTGATAAATCCAGACGGTTTTGCACGCTGCCGAACACGCAGGAAGTCAGTGAATAAGCATTCCGGAAATCGCACTGCCAT
CGATCCCGCCGCGCTGGAAA

Product: flavoprotein oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLVLSGNQYVRNYARAIGTESGL
VGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVPDTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPL
LLAALNCDPPEGSAGLAGAIVRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELD
FGDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVVGGLVEWLFAYPQRLSVTISNG
DRLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGS
VRSGNRAADLALSETNT

Sequences:

>Translated_417_residues
MPKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLVLSGNQYVRNYARAIGTESGL
VGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVPDTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPL
LLAALNCDPPEGSAGLAGAIVRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELD
FGDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVVGGLVEWLFAYPQRLSVTISNG
DRLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGS
VRSGNRAADLALSETNT
>Mature_416_residues
PKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLVLSGNQYVRNYARAIGTESGLV
GPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVPDTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPLL
LAALNCDPPEGSAGLAGAIVRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELDF
GDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVVGGLVEWLFAYPQRLSVTISNGD
RLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERRATFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSV
RSGNRAADLALSETNT

Specific function: Possible flavoprotein oxidoreductase. Probably part of an operon y4aABCD involved in the synthesis of an isoprenoid compound

COG id: COG2907

COG function: function code R; Predicted NAD/FAD-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To phytoene dehydrogenase and to amine oxidase

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4AB_RHISN (P55349)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443762.1
- ProteinModelPortal:   P55349
- GeneID:   962178
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a00450
- HOGENOM:   HBG296417
- ProtClustDB:   CLSK893843
- GO:   GO:0005488
- InterPro:   IPR002937
- InterPro:   IPR016040
- InterPro:   IPR003042
- InterPro:   IPR017830
- Gene3D:   G3DSA:3.40.50.720
- PRINTS:   PR00420
- TIGRFAMs:   TIGR03467

Pfam domain/function: PF01593 Amino_oxidase

EC number: NA

Molecular weight: Translated: 44584; Mature: 44452

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLV
CCCCEEEEECCCCCHHHHEEECCCCCEEEEEHHHHHCCHHHHHHHHCCCEEEEECCCEEE
LSGNQYVRNYARAIGTESGLVGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVP
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCC
DTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPLLLAALNCDPPEGSAGLAGAI
CHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELD
HHHHHHHCCHHHCHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC
FGDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVVG
CCCCEEEECCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHH
GLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERRA
HHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
TFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAADLALSETNT
CEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
PKNVHIIGAGISGLSAAVQLSNAGLPVHVYEATQQAGGRCRSFFDSATNLTIDNGNHLV
CCCEEEEECCCCCHHHHEEECCCCCEEEEEHHHHHCCHHHHHHHHCCCEEEEECCCEEE
LSGNQYVRNYARAIGTESGLVGPTSAKFPFVDISTVQRWQVDLGGGRLPTWVFHKARRVP
ECCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCHHHHHHHHCCC
DTRLWDYLKLAPILWAGADELVGNTIPCNGTLYRRLVRPLLLAALNCDPPEGSAGLAGAI
CHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
VRETLLAGGEACRPLVARDGLSAVLVEPAVKLLERRGATVRLSHKLRKLAKSAEIISELD
HHHHHHHCCHHHCHHHHHCCCHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHCC
FGDDKIAVGPDDAVILAVPPRAAATLLPGLKTPTEFRAVVNAHFRFDPPVGADPILGVVG
CCCCEEEECCCCEEEEEECCCHHHHHCCCCCCCHHHHHHHHCCEEECCCCCCCHHHHHHH
GLVEWLFAYPQRLSVTISNGDRLLDIPREEVVRVIWRDVCEAGGISGELPPWQIVCERRA
HHHHHHHHCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
TFQATPEQNALRPGPVTGCKNLFLAGDWTATGLPATIEGSVRSGNRAADLALSETNT
CEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424