Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668808
Identifier: 15668808
GI number: 15668808
Start: 555368
End: 555721
Strand: Direct
Name: 15668808
Synonym: MJ0627
Alternate gene names: NA
Gene position: 555368-555721 (Clockwise)
Preceding gene: 15668807
Following gene: 15668809
Centisome position: 33.36
GC content: 23.73
Gene sequence:
>354_bases ATGGAAATTGATGTTAAAAGCCCAGATTTAATTATCAATACTATAAGAGGTAATGAGAAAATATATTTTGATAAATCAAT ATTTGAAGAGAGCTTGGACAATAAGTTTGAAATTATTCAATATCTTATGAAAATTCTTGAAAGATTTTTGAAAATCTATG ATAATCATATAAAAGAAATAAAACTGCTCATAGATTCTGAAAATCATCCAGAACCGCATTTAATAGTTGTTATAAAATTT AAAAACAAAGAAAATATCTTTAAAATTTCAGAACAGATTGAAAACAAAATATACGAAAATCCAAAATCTAAAAATGTTTT AGTTTATCCCATTACAGGTGGGACAGATGTTTAA
Upstream 100 bases:
>100_bases GCATCCTGTTGCATGTGCTGTTGCTGTTATTGATAAAGATGGGATAAAAATAGCTACTAAGGGCAAATAATAATTTTTTA TAATACTTTTTGGTGAAATT
Downstream 100 bases:
>100_bases TCCCTTAGATTTTGTATATATTGCTGAATTCTTAGAAGAATCAAAAGTAGATAAAAAAGAGGCAAAAAATCGAACAATTA TTGGGAGATACTATTATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MEIDVKSPDLIINTIRGNEKIYFDKSIFEESLDNKFEIIQYLMKILERFLKIYDNHIKEIKLLIDSENHPEPHLIVVIKF KNKENIFKISEQIENKIYENPKSKNVLVYPITGGTDV
Sequences:
>Translated_117_residues MEIDVKSPDLIINTIRGNEKIYFDKSIFEESLDNKFEIIQYLMKILERFLKIYDNHIKEIKLLIDSENHPEPHLIVVIKF KNKENIFKISEQIENKIYENPKSKNVLVYPITGGTDV >Mature_117_residues MEIDVKSPDLIINTIRGNEKIYFDKSIFEESLDNKFEIIQYLMKILERFLKIYDNHIKEIKLLIDSENHPEPHLIVVIKF KNKENIFKISEQIENKIYENPKSKNVLVYPITGGTDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y627_METJA (Q58044)
Other databases:
- EMBL: L77117 - PIR: C64378 - RefSeq: NP_247611.1 - GeneID: 1451493 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0627 - NMPDR: fig|243232.1.peg.648 - TIGR: MJ0627 - ProtClustDB: CLSK2749901 - BioCyc: MJAN243232:MJ_0627-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13866; Mature: 13866
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDVKSPDLIINTIRGNEKIYFDKSIFEESLDNKFEIIQYLMKILERFLKIYDNHIKEI CCCCCCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE KLLIDSENHPEPHLIVVIKFKNKENIFKISEQIENKIYENPKSKNVLVYPITGGTDV EEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MEIDVKSPDLIINTIRGNEKIYFDKSIFEESLDNKFEIIQYLMKILERFLKIYDNHIKEI CCCCCCCCCEEEEEECCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHE KLLIDSENHPEPHLIVVIKFKNKENIFKISEQIENKIYENPKSKNVLVYPITGGTDV EEEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087