Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668785
Identifier: 15668785
GI number: 15668785
Start: 535439
End: 535843
Strand: Reverse
Name: 15668785
Synonym: MJ0605
Alternate gene names: NA
Gene position: 535843-535439 (Counterclockwise)
Preceding gene: 15668786
Following gene: 15668784
Centisome position: 32.18
GC content: 32.1
Gene sequence:
>405_bases GTGAAAGCTTTGCTTAATAAAGATATAAGGGAGGAGATTCAAGCACTTATAGAGATTGCAGAGGAGAATTTATCTGCAGC AAAAATTTTATTTGAAAATAAATTGTATAGGGATGCCGTTGCGAGGGCATATTATGCTATATTCCATTCTGCAAAGGCGC TATTATTGACTAAAAATCTCAATCCAAAAAAGCATGCTGGAGTAATAAAGATGTTTGGGCTTTATTTTGTTAATGAAGGA TATATTGAAGAAATATATGGGAGAATAATAACAAAAAGTTATAATTTAAGATGGAAGGCAGATTATACAACTGACAAGCC AACTGAAGAAGAAGCAGAATCAATAATATATGAGGCGGAGATGTTTGTTGATAGGATAAAAAAGGCATTAAAGGAGATAT TATGA
Upstream 100 bases:
>100_bases TATTGAAGTTTAATGGGCTGATTTAAATCGGTTATTAGAATATGATGAAGAAAGTTTGGAAATGGTTTAAAGGCTATGGA GCTATATATTTATTGTTAAG
Downstream 100 bases:
>100_bases ATGAAGAAAAAGCAATAAAAGAGTTTGTGAATGCATTAAAATCAAAATATAGAGGTAGAATTAAGAAAATTATACTATTT GGTAGCTATGCAAGGGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKALLNKDIREEIQALIEIAEENLSAAKILFENKLYRDAVARAYYAIFHSAKALLLTKNLNPKKHAGVIKMFGLYFVNEG YIEEIYGRIITKSYNLRWKADYTTDKPTEEEAESIIYEAEMFVDRIKKALKEIL
Sequences:
>Translated_134_residues MKALLNKDIREEIQALIEIAEENLSAAKILFENKLYRDAVARAYYAIFHSAKALLLTKNLNPKKHAGVIKMFGLYFVNEG YIEEIYGRIITKSYNLRWKADYTTDKPTEEEAESIIYEAEMFVDRIKKALKEIL >Mature_134_residues MKALLNKDIREEIQALIEIAEENLSAAKILFENKLYRDAVARAYYAIFHSAKALLLTKNLNPKKHAGVIKMFGLYFVNEG YIEEIYGRIITKSYNLRWKADYTTDKPTEEEAESIIYEAEMFVDRIKKALKEIL
Specific function: Unknown
COG id: COG1895
COG function: function code S; Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0332 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y605_METJA (Q58022)
Other databases:
- EMBL: L77117 - PIR: E64375 - RefSeq: NP_247587.1 - ProteinModelPortal: Q58022 - SMR: Q58022 - GeneID: 1451470 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0605 - NMPDR: fig|243232.1.peg.624 - TIGR: MJ0605 - HOGENOM: HBG539087 - OMA: PEIAHIF - ProtClustDB: CLSK382681 - BioCyc: MJAN243232:MJ_0605-MONOMER - InterPro: IPR007842
Pfam domain/function: PF05168 HEPN
EC number: NA
Molecular weight: Translated: 15596; Mature: 15596
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKALLNKDIREEIQALIEIAEENLSAAKILFENKLYRDAVARAYYAIFHSAKALLLTKNL CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC NPKKHAGVIKMFGLYFVNEGYIEEIYGRIITKSYNLRWKADYTTDKPTEEEAESIIYEAE CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHH MFVDRIKKALKEIL HHHHHHHHHHHHHC >Mature Secondary Structure MKALLNKDIREEIQALIEIAEENLSAAKILFENKLYRDAVARAYYAIFHSAKALLLTKNL CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCC NPKKHAGVIKMFGLYFVNEGYIEEIYGRIITKSYNLRWKADYTTDKPTEEEAESIIYEAE CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHH MFVDRIKKALKEIL HHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087